Gene name: SCM4
Reference locus (S288C): YGR049W
Gene biotype: protein_coding
Description: Protein SCM4; Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication
Top 10 interactors (score): CDC4 (0.837); CYB5 (0.803); OM14 (0.715); UGO1 (0.651); AIM11 (0.651); OM45 (0.617); MIM1 (0.607); TOM70 (0.574); PTH2 (0.562); IZH4 (0.562); TCD2 (0.552); HPT1 (0.544); LIA1 (0.544); PHO84 (0.521); IZH1 (0.515); STP4 (0.499); YJL068C (0.489); PTH1 (0.482); TRR2 (0.48); ECM4 (0.48)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:575014-575577:+ | gene-YGR049W_AKU4011 | rna-NM_001181178.1_AKU4011 | cds-NP_011563.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:255-818:- | gene-YGR049W_BG1 | rna-NM_001181178.1_BG1 | cds-NP_011563.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:577306-577869:+ | gene-YGR049W_Bruggeman | rna-NM_001181178.1_Bruggeman | cds-NP_011563.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:575712-576275:+ | gene-YGR049W_CAT1 | rna-NM_001181178.1_CAT1 | cds-NP_011563.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:576327-576890:+ | gene-YGR049W_CBS1585 | rna-NM_001181178.1_CBS1585 | cds-NP_011563.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:577622-578185:+ | gene-YGR049W_CBS436 | rna-NM_001181178.1_CBS436 | cds-NP_011563.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:569123-569686:+ | gene-YGR049W_CBS6412 | rna-NM_001181178.1_CBS6412 | cds-NP_011563.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:573123-573686:+ | gene-YGR049W_CBS6413 | rna-NM_001181178.1_CBS6413 | cds-NP_011563.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:591031-591594:+ | gene-YGR049W_CENPK1137D | rna-NM_001181178.1_CENPK1137D | cds-NP_011563.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:563255-563818:+ | gene-YGR049W_EthanolRed | rna-NM_001181178.1_EthanolRed | cds-NP_011563.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:566739-567302:+ | gene-YGR049W_FaliES1 | rna-NM_001181178.1_FaliES1 | cds-NP_011563.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:17709-18272:+ | gene-YGR049W_JAY291 | rna-NM_001181178.1_JAY291 | cds-NP_011563.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:573939-574502:+ | gene-YGR049W_MUCL30387 | rna-NM_001181178.1_MUCL30387 | cds-NP_011563.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:577335-577898:+ | gene-YGR049W_MUCL30388 | rna-NM_001181178.1_MUCL30388 | cds-NP_011563.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:572145-572708:+ | gene-YGR049W_MUCL39482 | rna-NM_001181178.1_MUCL39482 | cds-NP_011563.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:581957-582520:+ | gene-YGR049W_MUCL42920 | rna-NM_001181178.1_MUCL42920 | cds-NP_011563.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:591314-591877:+ | gene-YGR049W_NCIM3186 | rna-NM_001181178.1_NCIM3186 | cds-NP_011563.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:566340-566903:+ | gene-YGR049W_NCYC1407 | rna-NM_001181178.1_NCYC1407 | cds-NP_011563.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:569610-570173:+ | gene-YGR049W_PE2H3 | rna-NM_001181178.1_PE2H3 | cds-NP_011563.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:574717-575280:+ | gene-YGR049W_PE2H4 | rna-NM_001181178.1_PE2H4 | cds-NP_011563.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:591314-591877:+ | gene-YGR049W_S288C | rna-NM_001181178.1_S288C | cds-NP_011563.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:17767-18330:+ | gene-YGR049W_SA1 | rna-NM_001181178.1_SA1 | cds-NP_011563.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:586076-586639:+ | gene-YGR049W_ThermosaccDry | rna-NM_001181178.1_ThermosaccDry | cds-NP_011563.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:682989-683552:+ | gene-YGR049W_VR1 | rna-NM_001181178.1_VR1 | cds-NP_011563.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:41553-42116:+ | gene-YGR049W_ZTW1 | rna-NM_001181178.1_ZTW1 | cds-NP_011563.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:576524-577087:+ | gene-YGR049W_Sparadoxus | rna-NM_001181178.1_Sparadoxus | cds-NP_011563.1_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |