Gene name: SCJ1
Reference locus (S288C): YMR214W
Gene biotype: protein_coding
Description: DnaJ-related protein SCJ1; One of several homologs of bacterial chaperone DnaJ; located in the ER lumen where it cooperates with Kar2p to mediate maturation of proteins
Top 10 interactors (score): KAR2 (0.998); LHS1 (0.991); JEM1 (0.974); PDI1 (0.953); OST3 (0.94); CNE1 (0.925); ERJ5 (0.883); IRE1 (0.867); SEC22 (0.86); STE24 (0.86); ECM10 (0.85); SWA2 (0.848); JJJ2 (0.844); JJJ3 (0.844); SSE1 (0.844); SSA1 (0.843); ZUO1 (0.842); CWC23 (0.836); WBP1 (0.836); JAC1 (0.834)
Homologues (species, bitscore): DNAJA2 (Homo sapiens, 204.9); Dnaja2 (Mus musculus, 205.3); dnaja2 (Danio rerio, 211.1); dnaja2 (Xenopus tropicalis, 204.5); Droj2 (Drosophila melanogaster, 194.9); dnj-12 (Caenorhabditis elegans, 197.6); J3 (Arabidopsis thaliana, 209.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:735273-736406:+ | gene-YMR214W_AKU4011 | rna-NM_001182721.1_AKU4011 | cds-NP_013941.2_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:218201-219334:- | gene-YMR214W_BG1 | rna-NM_001182721.1_BG1 | cds-NP_013941.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:679486-680619:+ | gene-YMR214W_Bruggeman | rna-NM_001182721.1_Bruggeman | cds-NP_013941.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:682743-683876:+ | gene-YMR214W_CAT1 | rna-NM_001182721.1_CAT1 | cds-NP_013941.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:667534-668667:+ | gene-YMR214W_CBS1585 | rna-NM_001182721.1_CBS1585 | cds-NP_013941.2_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:671787-672920:+ | gene-YMR214W_CBS436 | rna-NM_001182721.1_CBS436 | cds-NP_013941.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:779095-780228:+ | gene-YMR214W_CBS6412 | rna-NM_001182721.1_CBS6412 | cds-NP_013941.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:666686-667819:+ | gene-YMR214W_CBS6413 | rna-NM_001182721.1_CBS6413 | cds-NP_013941.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:690074-691207:+ | gene-YMR214W_CENPK1137D | rna-NM_001182721.1_CENPK1137D | cds-NP_013941.2_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:727741-728874:+ | gene-YMR214W_EthanolRed | rna-NM_001182721.1_EthanolRed | cds-NP_013941.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:673393-674526:+ | gene-YMR214W_FaliES1 | rna-NM_001182721.1_FaliES1 | cds-NP_013941.2_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:111513-112646:- | gene-YMR214W_JAY291 | rna-NM_001182721.1_JAY291 | cds-NP_013941.2_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:673034-674167:+ | gene-YMR214W_MUCL30387 | rna-NM_001182721.1_MUCL30387 | cds-NP_013941.2_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:679813-680946:+ | gene-YMR214W_MUCL30388 | rna-NM_001182721.1_MUCL30388 | cds-NP_013941.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:668604-669737:+ | gene-YMR214W_MUCL39482 | rna-NM_001182721.1_MUCL39482 | cds-NP_013941.2_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:675928-677061:+ | gene-YMR214W_MUCL42920 | rna-NM_001182721.1_MUCL42920 | cds-NP_013941.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:695304-696437:+ | gene-YMR214W_NCIM3186 | rna-NM_001182721.1_NCIM3186 | cds-NP_013941.2_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:668260-669393:+ | gene-YMR214W_NCYC1407 | rna-NM_001182721.1_NCYC1407 | cds-NP_013941.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:678104-679237:+ | gene-YMR214W_PE2H3 | rna-NM_001182721.1_PE2H3 | cds-NP_013941.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:679119-680252:+ | gene-YMR214W_PE2H4 | rna-NM_001182721.1_PE2H4 | cds-NP_013941.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:695350-696483:+ | gene-YMR214W_S288C | rna-NM_001182721.1_S288C | cds-NP_013941.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:111624-112757:- | gene-YMR214W_SA1 | rna-NM_001182721.1_SA1 | cds-NP_013941.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:669564-670697:+ | gene-YMR214W_ThermosaccDry | rna-NM_001182721.1_ThermosaccDry | cds-NP_013941.2_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:682630-683763:+ | gene-YMR214W_VR1 | rna-NM_001182721.1_VR1 | cds-NP_013941.2_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:85269-86402:+ | gene-YMR214W_ZTW1 | rna-NM_001182721.1_ZTW1 | cds-NP_013941.2_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:687339-688481:+ | gene-YMR214W_Sparadoxus | rna-NM_001182721.1_Sparadoxus | cds-NP_013941.2_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |