Gene name: SBH2
Reference locus (S288C): YER019C-A
Gene biotype: protein_coding
Description: Arf family guanine nucleotide exchange factor sbh2; Ssh1p-Sss1p-Sbh2p complex component; involved in protein translocation into the endoplasmic reticulum; SBH2 has a paralog, SBH1, that arose from the whole genome duplication; Belongs to the SEC61-beta family
Top 10 interactors (score): SSS1 (0.999); SEC61 (0.999); SSH1 (0.999); SEC63 (0.999); SEC62 (0.998); WBP1 (0.993); SBH1 (0.981); ERV25 (0.979); STT3 (0.974); OST2 (0.971); OST1 (0.957); CNE1 (0.954); KAR2 (0.946); SEC11 (0.944); OST4 (0.943); OST6 (0.931); YPF1 (0.922); RPL39 (0.913); SPC1 (0.907); LHS1 (0.901)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:188307-188573:- | gene-YER019C-A_AKU4011 | rna-NM_001180031.1_AKU4011 | cds-NP_010936.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:237519-237785:+ | gene-YER019C-A_BG1 | rna-NM_001180031.1_BG1 | cds-NP_010936.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:196163-196429:- | gene-YER019C-A_Bruggeman | rna-NM_001180031.1_Bruggeman | cds-NP_010936.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:191053-191319:- | gene-YER019C-A_CAT1 | rna-NM_001180031.1_CAT1 | cds-NP_010936.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:188230-188496:- | gene-YER019C-A_CBS1585 | rna-NM_001180031.1_CBS1585 | cds-NP_010936.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:189815-190081:- | gene-YER019C-A_CBS436 | rna-NM_001180031.1_CBS436 | cds-NP_010936.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:188474-188740:- | gene-YER019C-A_CBS6412 | rna-NM_001180031.1_CBS6412 | cds-NP_010936.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:193260-193526:- | gene-YER019C-A_CBS6413 | rna-NM_001180031.1_CBS6413 | cds-NP_010936.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:192162-192428:- | gene-YER019C-A_CENPK1137D | rna-NM_001180031.1_CENPK1137D | cds-NP_010936.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:188933-189199:- | gene-YER019C-A_EthanolRed | rna-NM_001180031.1_EthanolRed | cds-NP_010936.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:189193-189459:- | gene-YER019C-A_FaliES1 | rna-NM_001180031.1_FaliES1 | cds-NP_010936.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:55815-56081:- | gene-YER019C-A_JAY291 | rna-NM_001180031.1_JAY291 | cds-NP_010936.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:192373-192639:- | gene-YER019C-A_MUCL30387 | rna-NM_001180031.1_MUCL30387 | cds-NP_010936.1_MUCL30387 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:188609-188875:- | gene-YER019C-A_MUCL30388 | rna-NM_001180031.1_MUCL30388 | cds-NP_010936.1_MUCL30388 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:187273-187539:- | gene-YER019C-A_MUCL39482 | rna-NM_001180031.1_MUCL39482 | cds-NP_010936.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:193388-193654:- | gene-YER019C-A_MUCL42920 | rna-NM_001180031.1_MUCL42920 | cds-NP_010936.1_MUCL42920 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:194272-194538:- | gene-YER019C-A_NCIM3186 | rna-NM_001180031.1_NCIM3186 | cds-NP_010936.1_NCIM3186 | 98.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:192345-192611:- | gene-YER019C-A_NCYC1407 | rna-NM_001180031.1_NCYC1407 | cds-NP_010936.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:196657-196923:- | gene-YER019C-A_PE2H3 | rna-NM_001180031.1_PE2H3 | cds-NP_010936.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:192556-192822:- | gene-YER019C-A_PE2H4 | rna-NM_001180031.1_PE2H4 | cds-NP_010936.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:194273-194539:- | gene-YER019C-A_S288C | rna-NM_001180031.1_S288C | cds-NP_010936.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:49147-49413:+ | gene-YER019C-A_SA1 | rna-NM_001180031.1_SA1 | cds-NP_010936.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:189964-190230:- | gene-YER019C-A_ThermosaccDry | rna-NM_001180031.1_ThermosaccDry | cds-NP_010936.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:188716-188982:- | gene-YER019C-A_VR1 | rna-NM_001180031.1_VR1 | cds-NP_010936.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:187176-187442:- | gene-YER019C-A_ZTW1 | rna-NM_001180031.1_ZTW1 | cds-NP_010936.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:190935-191201:- | gene-YER019C-A_Sparadoxus | rna-NM_001180031.1_Sparadoxus | cds-NP_010936.1_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |