Gene name: SAW1
Reference locus (S288C): YAL027W
Gene biotype: protein_coding
Description: 5'- and 3'-flap DNA binding protein; recruits Rad1p-Rad10p to single-strand annealing intermediates with 3' non-homologous tails for removal during double-strand break repair; complexes with Rad1p-Rad10p and stimulates its endonuclease activity; green fluorescent protein (GFP)-fusion protein localizes to the nucleus
Top 10 interactors (score): RAD10 (0.984); RAD1 (0.962); MSH2 (0.911); MSH3 (0.895); RAD52 (0.885); SLX4 (0.82); RAD14 (0.776); KCC4 (0.757); SLX1 (0.747); MUS81 (0.684); GIN4 (0.673); HMO1 (0.64); YEN1 (0.613); YRA1 (0.608); PGI1 (0.604); RAD16 (0.568); YHR033W (0.568); RAD51 (0.553); POP5 (0.525); MEC1 (0.521)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:79813-80598:+ | gene-YAL027W_AKU4011 | rna-NM_001178172.1_AKU4011 | cds-NP_009375.1_AKU4011 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000070.1:66940-67725:+ | gene-YAL027W_BG1 | rna-NM_001178172.1_BG1 | cds-NP_009375.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:94692-95477:+ | gene-YAL027W_Bruggeman | rna-NM_001178172.1_Bruggeman | cds-NP_009375.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:81039-81824:+ | gene-YAL027W_CAT1 | rna-NM_001178172.1_CAT1 | cds-NP_009375.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005359.1:92831-93616:+ | gene-YAL027W_CBS1585 | rna-NM_001178172.1_CBS1585 | cds-NP_009375.1_CBS1585 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:93079-93864:+ | gene-YAL027W_CBS436 | rna-NM_001178172.1_CBS436 | cds-NP_009375.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:78976-79761:+ | gene-YAL027W_CBS6412 | rna-NM_001178172.1_CBS6412 | cds-NP_009375.1_CBS6412 | 97.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:91095-91880:+ | gene-YAL027W_CBS6413 | rna-NM_001178172.1_CBS6413 | cds-NP_009375.1_CBS6413 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:94777-95562:+ | gene-YAL027W_CENPK1137D | rna-NM_001178172.1_CENPK1137D | cds-NP_009375.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:81235-82020:+ | gene-YAL027W_EthanolRed | rna-NM_001178172.1_EthanolRed | cds-NP_009375.1_EthanolRed | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:95858-96643:+ | gene-YAL027W_FaliES1 | rna-NM_001178172.1_FaliES1 | cds-NP_009375.1_FaliES1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000084.1:67129-67914:+ | gene-YAL027W_JAY291 | rna-NM_001178172.1_JAY291 | cds-NP_009375.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005407.1:95784-96569:+ | gene-YAL027W_MUCL30387 | rna-NM_001178172.1_MUCL30387 | cds-NP_009375.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:92331-93116:+ | gene-YAL027W_MUCL30388 | rna-NM_001178172.1_MUCL30388 | cds-NP_009375.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:91617-92402:+ | gene-YAL027W_MUCL39482 | rna-NM_001178172.1_MUCL39482 | cds-NP_009375.1_MUCL39482 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005423.1:93988-94773:+ | gene-YAL027W_MUCL42920 | rna-NM_001178172.1_MUCL42920 | cds-NP_009375.1_MUCL42920 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:94564-95349:+ | gene-YAL027W_NCIM3186 | rna-NM_001178172.1_NCIM3186 | cds-NP_009375.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005263.1:79495-80280:+ | gene-YAL027W_NCYC1407 | rna-NM_001178172.1_NCYC1407 | cds-NP_009375.1_NCYC1407 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:81405-82190:+ | gene-YAL027W_PE2H3 | rna-NM_001178172.1_PE2H3 | cds-NP_009375.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:81124-81909:+ | gene-YAL027W_PE2H4 | rna-NM_001178172.1_PE2H4 | cds-NP_009375.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:94687-95472:+ | gene-YAL027W_S288C | rna-NM_001178172.1_S288C | cds-NP_009375.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:23810-24595:+ | gene-YAL027W_SA1 | rna-NM_001178172.1_SA1 | cds-NP_009375.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:95376-96161:+ | gene-YAL027W_ThermosaccDry | rna-NM_001178172.1_ThermosaccDry | cds-NP_009375.1_ThermosaccDry | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:96655-97440:+ | gene-YAL027W_VR1 | rna-NM_001178172.1_VR1 | cds-NP_009375.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:67191-67976:+ | gene-YAL027W_ZTW1 | rna-NM_001178172.1_ZTW1 | cds-NP_009375.1_ZTW1 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047487.1:84824-85609:+ | gene-YAL027W_Sparadoxus | rna-NM_001178172.1_Sparadoxus | cds-NP_009375.1_Sparadoxus | 87.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |