Gene name: SAS10
Reference locus (S288C): YDL153C
Gene biotype: protein_coding
Description: Something about silencing protein 10; Subunit of U3-containing Small Subunit (SSU) processome complex; involved in production of 18S rRNA and assembly of small ribosomal subunit; disrupts silencing when overproduced; mutant has increased aneuploidy tolerance; essential gene
Top 10 interactors (score): MPP10 (0.999); KRE33 (0.999); DIP2 (0.999); UTP22 (0.999); UTP21 (0.999); NOC4 (0.999); PRP43 (0.999); NAN1 (0.999); ECM16 (0.999); NOP56 (0.999); RRP9 (0.999); ROK1 (0.999); ESF1 (0.999); UTP15 (0.999); SOF1 (0.999); UTP20 (0.999); MTR4 (0.999); PWP2 (0.999); HCA4 (0.999); UTP23 (0.999)
Homologues (species, bitscore): UTP3 (Homo sapiens, 65.5); Utp3 (Mus musculus, 67.0); utp3 (Danio rerio, 71.6); utp3 (Xenopus tropicalis, 69.7); Sas10 (Drosophila melanogaster, 72.0); EMB2777 (Arabidopsis thaliana, 105.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:165604-167436:- | gene-YDL153C_AKU4011 | rna-NM_001180213.1_AKU4011 | cds-NP_010128.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:382348-384174:+ | gene-YDL153C_BG1 | rna-NM_001180213.1_BG1 | cds-NP_010128.1_BG1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:181652-183478:- | gene-YDL153C_Bruggeman | rna-NM_001180213.1_Bruggeman | cds-NP_010128.1_Bruggeman | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:179971-181797:- | gene-YDL153C_CAT1 | rna-NM_001180213.1_CAT1 | cds-NP_010128.1_CAT1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:163635-165467:- | gene-YDL153C_CBS1585 | rna-NM_001180213.1_CBS1585 | cds-NP_010128.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:180577-182403:- | gene-YDL153C_CBS436 | rna-NM_001180213.1_CBS436 | cds-NP_010128.1_CBS436 | 99.2 | 99.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:162888-164720:- | gene-YDL153C_CBS6412 | rna-NM_001180213.1_CBS6412 | cds-NP_010128.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:182073-183905:- | gene-YDL153C_CBS6413 | rna-NM_001180213.1_CBS6413 | cds-NP_010128.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:179838-181670:- | gene-YDL153C_CENPK1137D | rna-NM_001180213.1_CENPK1137D | cds-NP_010128.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:176843-178675:- | gene-YDL153C_EthanolRed | rna-NM_001180213.1_EthanolRed | cds-NP_010128.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:182375-184207:- | gene-YDL153C_FaliES1 | rna-NM_001180213.1_FaliES1 | cds-NP_010128.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000032.1:35348-37174:+ | gene-YDL153C_JAY291 | rna-NM_001180213.1_JAY291 | cds-NP_010128.1_JAY291 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:180766-182592:- | gene-YDL153C_MUCL30387 | rna-NM_001180213.1_MUCL30387 | cds-NP_010128.1_MUCL30387 | 99.4 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:171627-173453:- | gene-YDL153C_MUCL30388 | rna-NM_001180213.1_MUCL30388 | cds-NP_010128.1_MUCL30388 | 99.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:164790-166622:- | gene-YDL153C_MUCL39482 | rna-NM_001180213.1_MUCL39482 | cds-NP_010128.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000307.1:2768-4600:+ | gene-YDL153C_MUCL42920 | rna-NM_001180213.1_MUCL42920 | cds-NP_010128.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:181109-182941:- | gene-YDL153C_NCIM3186 | rna-NM_001180213.1_NCIM3186 | cds-NP_010128.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:164723-166558:- | gene-YDL153C_NCYC1407 | rna-NM_001180213.1_NCYC1407 | cds-NP_010128.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:171964-173790:- | gene-YDL153C_PE2H3 | rna-NM_001180213.1_PE2H3 | cds-NP_010128.1_PE2H3 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:171968-173794:- | gene-YDL153C_PE2H4 | rna-NM_001180213.1_PE2H4 | cds-NP_010128.1_PE2H4 | 99.1 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:181186-183018:- | gene-YDL153C_S288C | rna-NM_001180213.1_S288C | cds-NP_010128.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:46748-48574:- | gene-YDL153C_SA1 | rna-NM_001180213.1_SA1 | cds-NP_010128.1_SA1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:182136-183968:- | gene-YDL153C_ThermosaccDry | rna-NM_001180213.1_ThermosaccDry | cds-NP_010128.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:182734-184560:- | gene-YDL153C_VR1 | rna-NM_001180213.1_VR1 | cds-NP_010128.1_VR1 | 99.2 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:180263-182095:- | gene-YDL153C_ZTW1 | rna-NM_001180213.1_ZTW1 | cds-NP_010128.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:182413-184242:- | gene-YDL153C_Sparadoxus | rna-NM_001180213.1_Sparadoxus | cds-NP_010128.1_Sparadoxus | 89.2 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |