Gene name: SAP30
Reference locus (S288C): YMR263W
Gene biotype: protein_coding
Description: Transcriptional regulatory protein SAP30; Component of Rpd3L histone deacetylase complex; involved in silencing at telomeres, rDNA, and silent mating-type loci; involved in telomere maintenance; Belongs to the SAP30 family
Top 10 interactors (score): PHO23 (0.998); SIN3 (0.997); RPD3 (0.997); DEP1 (0.996); SDS3 (0.995); RXT2 (0.994); UME1 (0.99); CTI6 (0.989); RXT3 (0.986); RCO1 (0.977); ASH1 (0.962); UME6 (0.958); EAF3 (0.946); SET3 (0.937); SIF2 (0.935); TOD6 (0.93); SNT1 (0.927); HOS2 (0.926); HHT2 (0.91); HTB2 (0.904)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:834362-834979:+ | gene-YMR263W_AKU4011 | rna-NM_001182770.1_AKU4011 | cds-NP_013990.1_AKU4011 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:119438-120043:- | gene-YMR263W_BG1 | rna-NM_001182770.1_BG1 | cds-NP_013990.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:779588-780193:+ | gene-YMR263W_Bruggeman | rna-NM_001182770.1_Bruggeman | cds-NP_013990.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:782610-783215:+ | gene-YMR263W_CAT1 | rna-NM_001182770.1_CAT1 | cds-NP_013990.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:766612-767229:+ | gene-YMR263W_CBS1585 | rna-NM_001182770.1_CBS1585 | cds-NP_013990.1_CBS1585 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:788556-789161:+ | gene-YMR263W_CBS436 | rna-NM_001182770.1_CBS436 | cds-NP_013990.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:878176-878784:+ | gene-YMR263W_CBS6412 | rna-NM_001182770.1_CBS6412 | cds-NP_013990.1_CBS6412 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:765723-766331:+ | gene-YMR263W_CBS6413 | rna-NM_001182770.1_CBS6413 | cds-NP_013990.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:789328-789933:+ | gene-YMR263W_CENPK1137D | rna-NM_001182770.1_CENPK1137D | cds-NP_013990.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:827065-827673:+ | gene-YMR263W_EthanolRed | rna-NM_001182770.1_EthanolRed | cds-NP_013990.1_EthanolRed | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:773092-773700:+ | gene-YMR263W_FaliES1 | rna-NM_001182770.1_FaliES1 | cds-NP_013990.1_FaliES1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:12838-13443:- | gene-YMR263W_JAY291 | rna-NM_001182770.1_JAY291 | cds-NP_013990.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:773437-774042:+ | gene-YMR263W_MUCL30387 | rna-NM_001182770.1_MUCL30387 | cds-NP_013990.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:782030-782635:+ | gene-YMR263W_MUCL30388 | rna-NM_001182770.1_MUCL30388 | cds-NP_013990.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:767700-768317:+ | gene-YMR263W_MUCL39482 | rna-NM_001182770.1_MUCL39482 | cds-NP_013990.1_MUCL39482 | 97.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:775765-776370:+ | gene-YMR263W_MUCL42920 | rna-NM_001182770.1_MUCL42920 | cds-NP_013990.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:794873-795478:+ | gene-YMR263W_NCIM3186 | rna-NM_001182770.1_NCIM3186 | cds-NP_013990.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:767333-767941:+ | gene-YMR263W_NCYC1407 | rna-NM_001182770.1_NCYC1407 | cds-NP_013990.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:777330-777935:+ | gene-YMR263W_PE2H3 | rna-NM_001182770.1_PE2H3 | cds-NP_013990.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:778376-778981:+ | gene-YMR263W_PE2H4 | rna-NM_001182770.1_PE2H4 | cds-NP_013990.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:794919-795524:+ | gene-YMR263W_S288C | rna-NM_001182770.1_S288C | cds-NP_013990.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:12910-13515:- | gene-YMR263W_SA1 | rna-NM_001182770.1_SA1 | cds-NP_013990.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:769261-769869:+ | gene-YMR263W_ThermosaccDry | rna-NM_001182770.1_ThermosaccDry | cds-NP_013990.1_ThermosaccDry | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:781863-782471:+ | gene-YMR263W_VR1 | rna-NM_001182770.1_VR1 | cds-NP_013990.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:184454-185062:+ | gene-YMR263W_ZTW1 | rna-NM_001182770.1_ZTW1 | cds-NP_013990.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:787641-788207:+ | gene-YMR263W_Sparadoxus | rna-NM_001182770.1_Sparadoxus | cds-NP_013990.1_Sparadoxus | 86.9 | 93.5 | Verified | 1 | 1 | 1 | False | True | False | False | False |