Gene name: SAP1
Reference locus (S288C): YER047C
Gene biotype: protein_coding
Description: Protein SAP1; Putative ATPase of the AAA family; interacts with the Sin1p transcriptional repressor in the two-hybrid system
Top 10 interactors (score): SMP3 (0.893); SMT3 (0.781); SAP4 (0.762); PMD1 (0.733); IST1 (0.72); SMC5 (0.701); DID2 (0.66); IXR1 (0.645); DID4 (0.636); BCK1 (0.617); MPH1 (0.609); RAD51 (0.608); FAR8 (0.602); MSH4 (0.58); BET2 (0.573); UFD4 (0.564); MFB1 (0.562); YND1 (0.562); SCS7 (0.549); LNP1 (0.542)
Homologues (species, bitscore): SPAST (Homo sapiens, 306.2); Spast (Mus musculus, 308.5); spast (Danio rerio, 304.3); fignl1 (Xenopus tropicalis, 305.4); spas (Drosophila melanogaster, 301.2); figl-1 (Caenorhabditis elegans, 298.5); AT2G45500 (Arabidopsis thaliana, 295.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:237926-240619:- | gene-YER047C_AKU4011 | rna-NM_001178938.1_AKU4011 | cds-NP_010966.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:185179-187872:+ | gene-YER047C_BG1 | rna-NM_001178938.1_BG1 | cds-NP_010966.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:246724-249417:- | gene-YER047C_Bruggeman | rna-NM_001178938.1_Bruggeman | cds-NP_010966.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:240882-243575:- | gene-YER047C_CAT1 | rna-NM_001178938.1_CAT1 | cds-NP_010966.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:237771-240464:- | gene-YER047C_CBS1585 | rna-NM_001178938.1_CBS1585 | cds-NP_010966.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:239696-242389:- | gene-YER047C_CBS436 | rna-NM_001178938.1_CBS436 | cds-NP_010966.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:237251-239933:- | gene-YER047C_CBS6412 | rna-NM_001178938.1_CBS6412 | cds-NP_010966.1_CBS6412 | 91.4 | 96.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:243265-245958:- | gene-YER047C_CBS6413 | rna-NM_001178938.1_CBS6413 | cds-NP_010966.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:241989-244685:- | gene-YER047C_CENPK1137D | rna-NM_001178938.1_CENPK1137D | cds-NP_010966.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:238253-240946:- | gene-YER047C_EthanolRed | rna-NM_001178938.1_EthanolRed | cds-NP_010966.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:238722-241415:- | gene-YER047C_FaliES1 | rna-NM_001178938.1_FaliES1 | cds-NP_010966.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:36488-39181:- | gene-YER047C_JAY291 | rna-NM_001178938.1_JAY291 | cds-NP_010966.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:242183-244876:- | gene-YER047C_MUCL30387 | rna-NM_001178938.1_MUCL30387 | cds-NP_010966.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:238349-241042:- | gene-YER047C_MUCL30388 | rna-NM_001178938.1_MUCL30388 | cds-NP_010966.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:236794-239487:- | gene-YER047C_MUCL39482 | rna-NM_001178938.1_MUCL39482 | cds-NP_010966.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:243866-246559:- | gene-YER047C_MUCL42920 | rna-NM_001178938.1_MUCL42920 | cds-NP_010966.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:243809-246502:- | gene-YER047C_NCIM3186 | rna-NM_001178938.1_NCIM3186 | cds-NP_010966.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:241875-244568:- | gene-YER047C_NCYC1407 | rna-NM_001178938.1_NCYC1407 | cds-NP_010966.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:252513-255206:- | gene-YER047C_PE2H3 | rna-NM_001178938.1_PE2H3 | cds-NP_010966.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:242454-245147:- | gene-YER047C_PE2H4 | rna-NM_001178938.1_PE2H4 | cds-NP_010966.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:243810-246503:- | gene-YER047C_S288C | rna-NM_001178938.1_S288C | cds-NP_010966.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:30598-33291:- | gene-YER047C_SA1 | rna-NM_001178938.1_SA1 | cds-NP_010966.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:239511-242204:- | gene-YER047C_ThermosaccDry | rna-NM_001178938.1_ThermosaccDry | cds-NP_010966.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:238590-241283:- | gene-YER047C_VR1 | rna-NM_001178938.1_VR1 | cds-NP_010966.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:236703-239396:- | gene-YER047C_ZTW1 | rna-NM_001178938.1_ZTW1 | cds-NP_010966.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:240605-243286:- | gene-YER047C_Sparadoxus | rna-NM_001178938.1_Sparadoxus | cds-NP_010966.1_Sparadoxus | 87.0 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |