Gene name: SAM37
Reference locus (S288C): YMR060C
Gene biotype: protein_coding
Description: Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; contributes to SAM complex stability
Top 10 interactors (score): TOM40 (0.999); TOM22 (0.999); SAM35 (0.999); SAM50 (0.999); MDM10 (0.998); TOM70 (0.997); TOM7 (0.996); TOM20 (0.996); TOM5 (0.994); TOM6 (0.987); POR1 (0.976); MMM1 (0.963); MDM12 (0.957); TIM8 (0.94); GEM1 (0.919); MIM1 (0.912); VMS1 (0.907); CDC48 (0.902); NPL4 (0.9); MDM34 (0.894)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:429245-430228:- | gene-YMR060C_AKU4011 | rna-NM_001182558.1_AKU4011 | cds-NP_013776.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:112554-113537:+ | gene-YMR060C_BG1 | rna-NM_001182558.1_BG1 | cds-NP_013776.1_BG1 | 97.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:371413-372396:- | gene-YMR060C_Bruggeman | rna-NM_001182558.1_Bruggeman | cds-NP_013776.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:371752-372735:- | gene-YMR060C_CAT1 | rna-NM_001182558.1_CAT1 | cds-NP_013776.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:362188-363171:- | gene-YMR060C_CBS1585 | rna-NM_001182558.1_CBS1585 | cds-NP_013776.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:367745-368728:- | gene-YMR060C_CBS436 | rna-NM_001182558.1_CBS436 | cds-NP_013776.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:475588-476571:- | gene-YMR060C_CBS6412 | rna-NM_001182558.1_CBS6412 | cds-NP_013776.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:361445-362428:- | gene-YMR060C_CBS6413 | rna-NM_001182558.1_CBS6413 | cds-NP_013776.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:385647-386630:- | gene-YMR060C_CENPK1137D | rna-NM_001182558.1_CENPK1137D | cds-NP_013776.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:362040-363023:- | gene-YMR060C_EthanolRed | rna-NM_001182558.1_EthanolRed | cds-NP_013776.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:365209-366192:- | gene-YMR060C_FaliES1 | rna-NM_001182558.1_FaliES1 | cds-NP_013776.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:70750-71733:+ | gene-YMR060C_JAY291 | rna-NM_001182558.1_JAY291 | cds-NP_013776.1_JAY291 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:367155-368138:- | gene-YMR060C_MUCL30387 | rna-NM_001182558.1_MUCL30387 | cds-NP_013776.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:371824-372807:- | gene-YMR060C_MUCL30388 | rna-NM_001182558.1_MUCL30388 | cds-NP_013776.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:362476-363459:- | gene-YMR060C_MUCL39482 | rna-NM_001182558.1_MUCL39482 | cds-NP_013776.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:369135-370118:- | gene-YMR060C_MUCL42920 | rna-NM_001182558.1_MUCL42920 | cds-NP_013776.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:391486-392469:- | gene-YMR060C_NCIM3186 | rna-NM_001182558.1_NCIM3186 | cds-NP_013776.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:362388-363371:- | gene-YMR060C_NCYC1407 | rna-NM_001182558.1_NCYC1407 | cds-NP_013776.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:368342-369325:- | gene-YMR060C_PE2H3 | rna-NM_001182558.1_PE2H3 | cds-NP_013776.1_PE2H3 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:374437-375420:- | gene-YMR060C_PE2H4 | rna-NM_001182558.1_PE2H4 | cds-NP_013776.1_PE2H4 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:391532-392515:- | gene-YMR060C_S288C | rna-NM_001182558.1_S288C | cds-NP_013776.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:157630-158613:+ | gene-YMR060C_SA1 | rna-NM_001182558.1_SA1 | cds-NP_013776.1_SA1 | 97.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:363012-363995:- | gene-YMR060C_ThermosaccDry | rna-NM_001182558.1_ThermosaccDry | cds-NP_013776.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:373907-374890:- | gene-YMR060C_VR1 | rna-NM_001182558.1_VR1 | cds-NP_013776.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:341292-342275:- | gene-YMR060C_ZTW1 | rna-NM_001182558.1_ZTW1 | cds-NP_013776.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:374888-375871:- | gene-YMR060C_Sparadoxus | rna-NM_001182558.1_Sparadoxus | cds-NP_013776.1_Sparadoxus | 87.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |