Gene name: SAM35
Reference locus (S288C): YHR083W
Gene biotype: protein_coding
Description: Component of the sorting and assembly machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their insertion into the outer membrane
Top 10 interactors (score): SAM50 (0.999); SAM37 (0.999); TOM40 (0.998); TOM22 (0.997); MDM10 (0.996); POR1 (0.991); TOM7 (0.99); TOM5 (0.986); TOM20 (0.984); TOM70 (0.983); MDM12 (0.949); MIM1 (0.945); TOM6 (0.941); MMM1 (0.937); TIM8 (0.916); VMS1 (0.912); MDM34 (0.912); NPL4 (0.908); CDC48 (0.907); MIC60 (0.867)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:259036-260025:+ | gene-YHR083W_AKU4011 | rna-NM_001179213.1_AKU4011 | cds-NP_011951.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:179384-180373:+ | gene-YHR083W_BG1 | rna-NM_001179213.1_BG1 | cds-NP_011951.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:266862-267851:+ | gene-YHR083W_Bruggeman | rna-NM_001179213.1_Bruggeman | cds-NP_011951.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:262004-262993:+ | gene-YHR083W_CAT1 | rna-NM_001179213.1_CAT1 | cds-NP_011951.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:258078-259067:+ | gene-YHR083W_CBS1585 | rna-NM_001179213.1_CBS1585 | cds-NP_011951.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:255943-256932:+ | gene-YHR083W_CBS436 | rna-NM_001179213.1_CBS436 | cds-NP_011951.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:261425-262414:+ | gene-YHR083W_CBS6412 | rna-NM_001179213.1_CBS6412 | cds-NP_011951.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:259117-260106:+ | gene-YHR083W_CBS6413 | rna-NM_001179213.1_CBS6413 | cds-NP_011951.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:265797-266786:+ | gene-YHR083W_CENPK1137D | rna-NM_001179213.1_CENPK1137D | cds-NP_011951.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:318641-319630:+ | gene-YHR083W_EthanolRed | rna-NM_001179213.1_EthanolRed | cds-NP_011951.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:259445-260434:+ | gene-YHR083W_FaliES1 | rna-NM_001179213.1_FaliES1 | cds-NP_011951.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000394.1:42172-43161:+ | gene-YHR083W_JAY291 | rna-NM_001179213.1_JAY291 | cds-NP_011951.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:266383-267372:+ | gene-YHR083W_MUCL30387 | rna-NM_001179213.1_MUCL30387 | cds-NP_011951.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:266246-267235:+ | gene-YHR083W_MUCL30388 | rna-NM_001179213.1_MUCL30388 | cds-NP_011951.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:258401-259390:+ | gene-YHR083W_MUCL39482 | rna-NM_001179213.1_MUCL39482 | cds-NP_011951.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:265149-266138:+ | gene-YHR083W_MUCL42920 | rna-NM_001179213.1_MUCL42920 | cds-NP_011951.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:272509-273498:+ | gene-YHR083W_NCIM3186 | rna-NM_001179213.1_NCIM3186 | cds-NP_011951.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:260865-261854:+ | gene-YHR083W_NCYC1407 | rna-NM_001179213.1_NCYC1407 | cds-NP_011951.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:260536-261525:+ | gene-YHR083W_PE2H3 | rna-NM_001179213.1_PE2H3 | cds-NP_011951.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:267983-268972:+ | gene-YHR083W_PE2H4 | rna-NM_001179213.1_PE2H4 | cds-NP_011951.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:272627-273616:+ | gene-YHR083W_S288C | rna-NM_001179213.1_S288C | cds-NP_011951.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:85372-86361:- | gene-YHR083W_SA1 | rna-NM_001179213.1_SA1 | cds-NP_011951.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:260536-261525:+ | gene-YHR083W_ThermosaccDry | rna-NM_001179213.1_ThermosaccDry | cds-NP_011951.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:268411-269400:+ | gene-YHR083W_VR1 | rna-NM_001179213.1_VR1 | cds-NP_011951.1_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:252091-253080:+ | gene-YHR083W_ZTW1 | rna-NM_001179213.1_ZTW1 | cds-NP_011951.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:257845-258834:+ | gene-YHR083W_Sparadoxus | rna-NM_001179213.1_Sparadoxus | cds-NP_011951.1_Sparadoxus | 87.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |