Gene name: RXT2
Reference locus (S288C): YBR095C
Gene biotype: protein_coding
Description: Transcriptional regulatory protein RXT2; Component of the histone deacetylase Rpd3L complex; possibly involved in cell fusion and invasive growth; relocalizes to the cytosol in response to hypoxia
Top 10 interactors (score): PHO23 (0.999); CTI6 (0.998); SDS3 (0.998); UME1 (0.998); RPD3 (0.998); RXT3 (0.997); SAP30 (0.994); DEP1 (0.993); SIN3 (0.991); EAF3 (0.984); UME6 (0.984); ASH1 (0.984); RCO1 (0.983); SET3 (0.966); HOS2 (0.937); TOD6 (0.925); SNT1 (0.921); DOT6 (0.908); SIF2 (0.903); TOS4 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:416770-418062:- | gene-YBR095C_AKU4011 | rna-NM_001178443.1_AKU4011 | cds-NP_009653.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:407811-409103:- | gene-YBR095C_BG1 | rna-NM_001178443.1_BG1 | cds-NP_009653.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:418547-419839:- | gene-YBR095C_Bruggeman | rna-NM_001178443.1_Bruggeman | cds-NP_009653.2_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:421319-422611:- | gene-YBR095C_CAT1 | rna-NM_001178443.1_CAT1 | cds-NP_009653.2_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:409055-410347:- | gene-YBR095C_CBS1585 | rna-NM_001178443.1_CBS1585 | cds-NP_009653.2_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:417176-418468:- | gene-YBR095C_CBS436 | rna-NM_001178443.1_CBS436 | cds-NP_009653.2_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:507283-508575:- | gene-YBR095C_CBS6412 | rna-NM_001178443.1_CBS6412 | cds-NP_009653.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:414194-415486:- | gene-YBR095C_CBS6413 | rna-NM_001178443.1_CBS6413 | cds-NP_009653.2_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:426306-427598:- | gene-YBR095C_CENPK1137D | rna-NM_001178443.1_CENPK1137D | cds-NP_009653.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:543564-544856:- | gene-YBR095C_EthanolRed | rna-NM_001178443.1_EthanolRed | cds-NP_009653.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:432847-434139:- | gene-YBR095C_FaliES1 | rna-NM_001178443.1_FaliES1 | cds-NP_009653.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000312.1:3750-5042:- | gene-YBR095C_JAY291 | rna-NM_001178443.1_JAY291 | cds-NP_009653.2_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:420581-421873:- | gene-YBR095C_MUCL30387 | rna-NM_001178443.1_MUCL30387 | cds-NP_009653.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:419581-420873:- | gene-YBR095C_MUCL30388 | rna-NM_001178443.1_MUCL30388 | cds-NP_009653.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:407198-408490:- | gene-YBR095C_MUCL39482 | rna-NM_001178443.1_MUCL39482 | cds-NP_009653.2_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:416261-417553:- | gene-YBR095C_MUCL42920 | rna-NM_001178443.1_MUCL42920 | cds-NP_009653.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:434203-435495:- | gene-YBR095C_NCIM3186 | rna-NM_001178443.1_NCIM3186 | cds-NP_009653.2_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:409977-411269:- | gene-YBR095C_NCYC1407 | rna-NM_001178443.1_NCYC1407 | cds-NP_009653.2_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:422595-423887:- | gene-YBR095C_PE2H3 | rna-NM_001178443.1_PE2H3 | cds-NP_009653.2_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:420271-421563:- | gene-YBR095C_PE2H4 | rna-NM_001178443.1_PE2H4 | cds-NP_009653.2_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:434406-435698:- | gene-YBR095C_S288C | rna-NM_001178443.1_S288C | cds-NP_009653.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:42009-43301:+ | gene-YBR095C_SA1 | rna-NM_001178443.1_SA1 | cds-NP_009653.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:431854-433146:- | gene-YBR095C_ThermosaccDry | rna-NM_001178443.1_ThermosaccDry | cds-NP_009653.2_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:413857-415149:- | gene-YBR095C_VR1 | rna-NM_001178443.1_VR1 | cds-NP_009653.2_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:407517-408809:- | gene-YBR095C_ZTW1 | rna-NM_001178443.1_ZTW1 | cds-NP_009653.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:444395-445690:- | gene-YBR095C_Sparadoxus | rna-NM_001178443.1_Sparadoxus | cds-NP_009653.2_Sparadoxus | 89.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |