Gene name: RVS161
Reference locus (S288C): YCR009C
Gene biotype: protein_coding
Description: Reduced viability upon starvation protein 161; Amphiphysin-like lipid raft protein; N-BAR domain protein that interacts with Rvs167p and regulates polarization of the actin cytoskeleton, endocytosis, cell polarity, cell fusion and viability following starvation or osmotic stress
Top 10 interactors (score): EDE1 (0.994); LAS17 (0.991); RVS167 (0.986); BZZ1 (0.986); FUS2 (0.983); VPS1 (0.982); APL3 (0.981); ACT1 (0.974); INP52 (0.972); END3 (0.966); ARP2 (0.958); ABP1 (0.953); CDC42 (0.953); YAP1801 (0.952); SLA2 (0.946); VRP1 (0.944); ENT1 (0.94); SLA1 (0.939); AIM3 (0.934); ENT2 (0.93)
Homologues (species, bitscore): BIN3 (Homo sapiens, 89.4); Bin3 (Mus musculus, 91.7); amph (Danio rerio, 65.9); bin3 (Xenopus tropicalis, 76.3); Amph (Drosophila melanogaster, 58.2); amph-1 (Caenorhabditis elegans, 54.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:125120-125917:- | gene-YCR009C_AKU4011 | rna-NM_001178722.1_AKU4011 | cds-NP_009935.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:20090-20887:+ | gene-YCR009C_BG1 | rna-NM_001178722.1_BG1 | cds-NP_009935.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:120930-121727:- | gene-YCR009C_Bruggeman | rna-NM_001178722.1_Bruggeman | cds-NP_009935.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:131332-132129:- | gene-YCR009C_CAT1 | rna-NM_001178722.1_CAT1 | cds-NP_009935.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:125770-126567:- | gene-YCR009C_CBS1585 | rna-NM_001178722.1_CBS1585 | cds-NP_009935.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:131028-131825:- | gene-YCR009C_CBS436 | rna-NM_001178722.1_CBS436 | cds-NP_009935.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:113230-114027:- | gene-YCR009C_CBS6412 | rna-NM_001178722.1_CBS6412 | cds-NP_009935.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:125077-125874:- | gene-YCR009C_CBS6413 | rna-NM_001178722.1_CBS6413 | cds-NP_009935.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:136223-137020:- | gene-YCR009C_CENPK1137D | rna-NM_001178722.1_CENPK1137D | cds-NP_009935.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:123138-123935:- | gene-YCR009C_EthanolRed | rna-NM_001178722.1_EthanolRed | cds-NP_009935.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:125436-126233:- | gene-YCR009C_FaliES1 | rna-NM_001178722.1_FaliES1 | cds-NP_009935.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:39605-40402:- | gene-YCR009C_JAY291 | rna-NM_001178722.1_JAY291 | cds-NP_009935.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:118735-119532:- | gene-YCR009C_MUCL30387 | rna-NM_001178722.1_MUCL30387 | cds-NP_009935.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:117708-118505:- | gene-YCR009C_MUCL30388 | rna-NM_001178722.1_MUCL30388 | cds-NP_009935.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:126187-126984:- | gene-YCR009C_MUCL39482 | rna-NM_001178722.1_MUCL39482 | cds-NP_009935.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:121421-122218:- | gene-YCR009C_MUCL42920 | rna-NM_001178722.1_MUCL42920 | cds-NP_009935.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:130377-131174:- | gene-YCR009C_NCIM3186 | rna-NM_001178722.1_NCIM3186 | cds-NP_009935.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:126669-127453:- | gene-YCR009C_NCYC1407 | rna-NM_001178722.1_NCYC1407 | cds-NP_009935.1_NCYC1407 | 96.3 | 98.3 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:130864-131661:- | gene-YCR009C_PE2H3 | rna-NM_001178722.1_PE2H3 | cds-NP_009935.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:130802-131599:- | gene-YCR009C_PE2H4 | rna-NM_001178722.1_PE2H4 | cds-NP_009935.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:130745-131542:- | gene-YCR009C_S288C | rna-NM_001178722.1_S288C | cds-NP_009935.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:20128-20925:+ | gene-YCR009C_SA1 | rna-NM_001178722.1_SA1 | cds-NP_009935.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:126004-126801:- | gene-YCR009C_ThermosaccDry | rna-NM_001178722.1_ThermosaccDry | cds-NP_009935.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:136933-137730:- | gene-YCR009C_VR1 | rna-NM_001178722.1_VR1 | cds-NP_009935.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:124939-125736:- | gene-YCR009C_ZTW1 | rna-NM_001178722.1_ZTW1 | cds-NP_009935.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:157069-157866:- | gene-YCR009C_Sparadoxus | rna-NM_001178722.1_Sparadoxus | cds-NP_009935.1_Sparadoxus | 93.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |