Gene name: RVB2
Reference locus (S288C): YPL235W
Gene biotype: protein_coding
Description: RuvB-like protein 2; ATP-dependent DNA helicase, also known as reptin; member of the AAA+ and RuvB protein families, similar to Rvb1p; conserved component of multiple complexes including the INO80 complex, the Swr1 complex, and the R2TP complex (Rvb1-Rvb2-Tah1-Pih1); involved in multiple processes such as chromatin remodeling, box C/D snoRNP assembly, and RNA polymerase II assembly
Top 10 interactors (score): IES6 (0.999); TAH1 (0.999); ARP6 (0.999); PIH1 (0.999); RVB1 (0.999); ACT1 (0.999); SWR1 (0.999); ARP5 (0.999); VPS72 (0.999); TTI1 (0.999); SWC4 (0.999); VPS71 (0.999); INO80 (0.999); ARP4 (0.999); TRA1 (0.999); YAF9 (0.997); TEL2 (0.997); EAF3 (0.996); NHP10 (0.995); SWC7 (0.995)
Homologues (species, bitscore): RUVBL2 (Homo sapiens, 652.9); Ruvbl2 (Mus musculus, 653.3); ruvbl2 (Danio rerio, 656.4); ruvbl2 (Xenopus tropicalis, 666.0); rept (Drosophila melanogaster, 613.6); ruvb-2 (Caenorhabditis elegans, 540.4); AT5G67630 (Arabidopsis thaliana, 648.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:80979-82394:+ | gene-YPL235W_AKU4011 | rna-NM_001184049.1_AKU4011 | cds-NP_015089.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:286922-288337:+ | gene-YPL235W_BG1 | rna-NM_001184049.1_BG1 | cds-NP_015089.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:106187-107602:+ | gene-YPL235W_Bruggeman | rna-NM_001184049.1_Bruggeman | cds-NP_015089.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:103228-104643:+ | gene-YPL235W_CAT1 | rna-NM_001184049.1_CAT1 | cds-NP_015089.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:85293-86708:+ | gene-YPL235W_CBS1585 | rna-NM_001184049.1_CBS1585 | cds-NP_015089.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:99714-101129:+ | gene-YPL235W_CBS436 | rna-NM_001184049.1_CBS436 | cds-NP_015089.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:90457-91872:+ | gene-YPL235W_CBS6412 | rna-NM_001184049.1_CBS6412 | cds-NP_015089.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:81442-82857:+ | gene-YPL235W_CBS6413 | rna-NM_001184049.1_CBS6413 | cds-NP_015089.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:103167-104582:+ | gene-YPL235W_CENPK1137D | rna-NM_001184049.1_CENPK1137D | cds-NP_015089.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:80378-81793:+ | gene-YPL235W_EthanolRed | rna-NM_001184049.1_EthanolRed | cds-NP_015089.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:87185-88600:+ | gene-YPL235W_FaliES1 | rna-NM_001184049.1_FaliES1 | cds-NP_015089.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000293.1:21923-23338:- | gene-YPL235W_JAY291 | rna-NM_001184049.1_JAY291 | cds-NP_015089.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:98025-99440:+ | gene-YPL235W_MUCL30387 | rna-NM_001184049.1_MUCL30387 | cds-NP_015089.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:96465-97880:+ | gene-YPL235W_MUCL30388 | rna-NM_001184049.1_MUCL30388 | cds-NP_015089.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:78423-79838:+ | gene-YPL235W_MUCL39482 | rna-NM_001184049.1_MUCL39482 | cds-NP_015089.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:97293-98708:+ | gene-YPL235W_MUCL42920 | rna-NM_001184049.1_MUCL42920 | cds-NP_015089.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:103215-104630:+ | gene-YPL235W_NCIM3186 | rna-NM_001184049.1_NCIM3186 | cds-NP_015089.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:84870-86285:+ | gene-YPL235W_NCYC1407 | rna-NM_001184049.1_NCYC1407 | cds-NP_015089.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:92602-94017:+ | gene-YPL235W_PE2H3 | rna-NM_001184049.1_PE2H3 | cds-NP_015089.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:92245-93660:+ | gene-YPL235W_PE2H4 | rna-NM_001184049.1_PE2H4 | cds-NP_015089.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:103232-104647:+ | gene-YPL235W_S288C | rna-NM_001184049.1_S288C | cds-NP_015089.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:45114-46529:+ | gene-YPL235W_SA1 | rna-NM_001184049.1_SA1 | cds-NP_015089.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:87186-88601:+ | gene-YPL235W_ThermosaccDry | rna-NM_001184049.1_ThermosaccDry | cds-NP_015089.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:327067-328482:+ | gene-YPL235W_VR1 | rna-NM_001184049.1_VR1 | cds-NP_015089.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:86730-88145:+ | gene-YPL235W_ZTW1 | rna-NM_001184049.1_ZTW1 | cds-NP_015089.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:88256-89671:+ | gene-YPL235W_Sparadoxus | rna-NM_001184049.1_Sparadoxus | cds-NP_015089.1_Sparadoxus | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |