RUF23 (YNCF0013W)

Gene profile

Gene name: RUF23
Reference locus (S288C): YNCF0013W
Gene biotype: ncRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:211869-212122:+ gene-YNCF0013W_AKU4011 rna-NR_132175.1_AKU4011 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000071.1:48920-49173:- gene-YNCF0013W_BG1 rna-NR_132175.1_BG1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:215526-215778:+ gene-YNCF0013W_Bruggeman rna-NR_132175.1_Bruggeman Unknown 99.6 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:217502-217754:+ gene-YNCF0013W_CAT1 rna-NR_132175.1_CAT1 Unknown 99.6 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:213361-213614:+ gene-YNCF0013W_CBS1585 rna-NR_132175.1_CBS1585 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:186324-186576:+ gene-YNCF0013W_CBS436 rna-NR_132175.1_CBS436 Unknown 99.6 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:212438-212691:+ gene-YNCF0013W_CBS6412 rna-NR_132175.1_CBS6412 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:215096-215349:+ gene-YNCF0013W_CBS6413 rna-NR_132175.1_CBS6413 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:217813-218066:+ gene-YNCF0013W_CENPK1137D rna-NR_132175.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:210976-211229:+ gene-YNCF0013W_EthanolRed rna-NR_132175.1_EthanolRed Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:212627-212880:+ gene-YNCF0013W_FaliES1 rna-NR_132175.1_FaliES1 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000453.1:15761-16014:+ gene-YNCF0013W_JAY291 rna-NR_132175.1_JAY291 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:215961-216214:+ gene-YNCF0013W_MUCL30387 rna-NR_132175.1_MUCL30387 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:211453-211706:+ gene-YNCF0013W_MUCL30388 rna-NR_132175.1_MUCL30388 Unknown 96.4 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:211279-211532:+ gene-YNCF0013W_MUCL39482 rna-NR_132175.1_MUCL39482 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000197.1:247-499:- gene-YNCF0013W_MUCL42920 rna-NR_132175.1_MUCL42920 Unknown 99.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:221713-221966:+ gene-YNCF0013W_NCIM3186 rna-NR_132175.1_NCIM3186 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:212161-212414:+ gene-YNCF0013W_NCYC1407 rna-NR_132175.1_NCYC1407 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:254168-254421:+ gene-YNCF0013W_PE2H3 rna-NR_132175.1_PE2H3 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:253716-253969:+ gene-YNCF0013W_PE2H4 rna-NR_132175.1_PE2H4 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:221714-221967:+ gene-YNCF0013W_S288C rna-NR_132175.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:102503-102755:- gene-YNCF0013W_SA1 rna-NR_132175.1_SA1 Unknown 99.6 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:211784-212037:+ gene-YNCF0013W_ThermosaccDry rna-NR_132175.1_ThermosaccDry Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:227540-227793:+ gene-YNCF0013W_VR1 rna-NR_132175.1_VR1 Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:142255-142508:+ gene-YNCF0013W_ZTW1 rna-NR_132175.1_ZTW1 Unknown 97.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files