RUF22 (YNCF0010C)

Gene profile

Gene name: RUF22
Reference locus (S288C): YNCF0010C
Gene biotype: ncRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:189536-190018:- gene-YNCF0010C_AKU4011 rna-NR_132174.1_AKU4011 Unknown 91.6 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000071.1:70646-71158:+ gene-YNCF0010C_BG1 rna-NR_132174.1_BG1 Unknown 98.0 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:191629-192142:- gene-YNCF0010C_Bruggeman rna-NR_132174.1_Bruggeman Unknown 98.2 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:194874-195387:- gene-YNCF0010C_CAT1 rna-NR_132174.1_CAT1 Unknown 98.8 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:191027-191509:- gene-YNCF0010C_CBS1585 rna-NR_132174.1_CBS1585 Unknown 91.6 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:164227-164739:- gene-YNCF0010C_CBS436 rna-NR_132174.1_CBS436 Unknown 98.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:190108-190590:- gene-YNCF0010C_CBS6412 rna-NR_132174.1_CBS6412 Unknown 91.6 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:192762-193245:- gene-YNCF0010C_CBS6413 rna-NR_132174.1_CBS6413 Unknown 92.2 93.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:195370-195854:- gene-YNCF0010C_CENPK1137D rna-NR_132174.1_CENPK1137D Unknown 93.5 94.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:188643-189126:- gene-YNCF0010C_EthanolRed rna-NR_132174.1_EthanolRed Unknown 91.2 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:190293-190776:- gene-YNCF0010C_FaliES1 rna-NR_132174.1_FaliES1 Unknown 91.2 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000452.1:37020-37532:- gene-YNCF0010C_JAY291 rna-NR_132174.1_JAY291 Unknown 98.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000350.1:6-501:- gene-YNCF0010C_MUCL30387 rna-NR_132174.1_MUCL30387 Unknown 94.9 96.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:189112-189594:- gene-YNCF0010C_MUCL30388 rna-NR_132174.1_MUCL30388 Unknown 92.4 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:188945-189428:- gene-YNCF0010C_MUCL39482 rna-NR_132174.1_MUCL39482 Unknown 92.2 93.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:188223-188736:- gene-YNCF0010C_MUCL42920 rna-NR_132174.1_MUCL42920 Unknown 96.8 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:199298-199812:- gene-YNCF0010C_NCIM3186 rna-NR_132174.1_NCIM3186 Unknown 97.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:189827-190310:- gene-YNCF0010C_NCYC1407 rna-NR_132174.1_NCYC1407 Unknown 92.2 93.9 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:232234-232746:- gene-YNCF0010C_PE2H3 rna-NR_132174.1_PE2H3 Unknown 98.0 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:231782-232294:- gene-YNCF0010C_PE2H4 rna-NR_132174.1_PE2H4 Unknown 98.0 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:199299-199813:- gene-YNCF0010C_S288C rna-NR_132174.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000011.1:124623-125107:+ gene-YNCF0010C_SA1 rna-NR_132174.1_SA1 Unknown 93.5 94.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:189450-189933:- gene-YNCF0010C_ThermosaccDry rna-NR_132174.1_ThermosaccDry Unknown 91.2 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:205465-205977:- gene-YNCF0010C_VR1 rna-NR_132174.1_VR1 Unknown 98.2 99.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000013.1:119924-120406:- gene-YNCF0010C_ZTW1 rna-NR_132174.1_ZTW1 Unknown 91.6 93.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:213400-213894:- gene-YNCF0010C_Sparadoxus rna-NR_132174.1_Sparadoxus Unknown 72.2 92.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files