RUF21 (YNCF0001C)

Gene profile

Gene name: RUF21
Reference locus (S288C): YNCF0001C
Gene biotype: ncRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:54150-54851:- gene-YNCF0001C_AKU4011 rna-NR_132172.1_AKU4011 Unknown 98.5 99.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000182.1:14881-15638:+ gene-YNCF0001C_BG1 rna-NR_132172.1_BG1 Unknown 92.8 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:53034-53723:- gene-YNCF0001C_Bruggeman rna-NR_132172.1_Bruggeman Unknown 96.8 97.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:57920-58616:- gene-YNCF0001C_CAT1 rna-NR_132172.1_CAT1 Unknown 96.2 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:54828-55660:- gene-YNCF0001C_CBS1585 rna-NR_132172.1_CBS1585 Unknown 83.6 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005348.1:28466-29160:- gene-YNCF0001C_CBS436 rna-NR_132172.1_CBS436 Unknown 97.0 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:54848-55396:- gene-YNCF0001C_CBS6412 rna-NR_132172.1_CBS6412 Unknown 77.3 77.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:57226-57926:- gene-YNCF0001C_CBS6413 rna-NR_132172.1_CBS6413 Unknown 98.8 99.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:54140-54851:- gene-YNCF0001C_CENPK1137D rna-NR_132172.1_CENPK1137D Unknown 80.6 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:53470-53978:- gene-YNCF0001C_EthanolRed rna-NR_132172.1_EthanolRed Unknown 71.6 71.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:54702-55402:- gene-YNCF0001C_FaliES1 rna-NR_132172.1_FaliES1 Unknown 98.7 99.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000448.1:63159-63852:- gene-YNCF0001C_JAY291 rna-NR_132172.1_JAY291 Unknown 97.1 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:55120-55823:- gene-YNCF0001C_MUCL30387 rna-NR_132172.1_MUCL30387 Unknown 99.0 99.4 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:53028-53722:- gene-YNCF0001C_MUCL30388 rna-NR_132172.1_MUCL30388 Unknown 97.0 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:53344-54045:- gene-YNCF0001C_MUCL39482 rna-NR_132172.1_MUCL39482 Unknown 98.5 99.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:51050-51744:- gene-YNCF0001C_MUCL42920 rna-NR_132172.1_MUCL42920 Unknown 97.0 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:57956-58509:- gene-YNCF0001C_NCIM3186 rna-NR_132172.1_NCIM3186 Unknown 77.9 78.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:54415-55118:- gene-YNCF0001C_NCYC1407 rna-NR_132172.1_NCYC1407 Unknown 99.1 99.5 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:74314-75007:- gene-YNCF0001C_PE2H3 rna-NR_132172.1_PE2H3 Unknown 97.1 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:73865-74558:- gene-YNCF0001C_PE2H4 rna-NR_132172.1_PE2H4 Unknown 97.1 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:57815-58521:- gene-YNCF0001C_S288C rna-NR_132172.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:277114-277821:+ gene-YNCF0001C_SA1 rna-NR_132172.1_SA1 Unknown 99.2 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:53890-54595:- gene-YNCF0001C_ThermosaccDry rna-NR_132172.1_ThermosaccDry Unknown 99.4 99.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:62440-63133:- gene-YNCF0001C_VR1 rna-NR_132172.1_VR1 Unknown 97.0 98.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000012.1:39186-39885:- gene-YNCF0001C_ZTW1 rna-NR_132172.1_ZTW1 Unknown 98.3 99.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:78234-78917:- gene-YNCF0001C_Sparadoxus rna-NR_132172.1_Sparadoxus Unknown 74.0 91.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files