Gene name: RTS3
Reference locus (S288C): YGR161C
Gene biotype: protein_coding
Description: Protein phosphatase type 2a regulatory subunit rts3; Putative component of the protein phosphatase type 2A complex
Top 10 interactors (score): PPH21 (0.954); TPD3 (0.946); RTS1 (0.847); CDC55 (0.838); SIT4 (0.774); PPH22 (0.731); SDS24 (0.73); SAP185 (0.674); RRT5 (0.651); SDS23 (0.592); BCH2 (0.584); YGR017W (0.572); IGO1 (0.561); YJL144W (0.55); HSE1 (0.512); LSM6 (0.499); PPH3 (0.483); HSP42 (0.479); SAP190 (0.455); DAT1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:788262-789053:- | gene-YGR161C_AKU4011 | rna-NM_001181290.3_AKU4011 | cds-NP_011677.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:66391-67182:- | gene-YGR161C_BG1 | rna-NM_001181290.3_BG1 | cds-NP_011677.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:793944-794735:- | gene-YGR161C_Bruggeman | rna-NM_001181290.3_Bruggeman | cds-NP_011677.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:790031-790822:- | gene-YGR161C_CAT1 | rna-NM_001181290.3_CAT1 | cds-NP_011677.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:788978-789769:- | gene-YGR161C_CBS1585 | rna-NM_001181290.3_CBS1585 | cds-NP_011677.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:792875-793666:- | gene-YGR161C_CBS436 | rna-NM_001181290.3_CBS436 | cds-NP_011677.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:780009-780800:- | gene-YGR161C_CBS6412 | rna-NM_001181290.3_CBS6412 | cds-NP_011677.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:785842-786633:- | gene-YGR161C_CBS6413 | rna-NM_001181290.3_CBS6413 | cds-NP_011677.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:808360-809156:- | gene-YGR161C_CENPK1137D | rna-NM_001181290.3_CENPK1137D | cds-NP_011677.3_CENPK1137D | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:774364-775155:- | gene-YGR161C_EthanolRed | rna-NM_001181290.3_EthanolRed | cds-NP_011677.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:778754-779545:- | gene-YGR161C_FaliES1 | rna-NM_001181290.3_FaliES1 | cds-NP_011677.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000112.1:21166-21957:- | gene-YGR161C_JAY291 | rna-NM_001181290.3_JAY291 | cds-NP_011677.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:791684-792475:- | gene-YGR161C_MUCL30387 | rna-NM_001181290.3_MUCL30387 | cds-NP_011677.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:791382-792173:- | gene-YGR161C_MUCL30388 | rna-NM_001181290.3_MUCL30388 | cds-NP_011677.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:784552-785343:- | gene-YGR161C_MUCL39482 | rna-NM_001181290.3_MUCL39482 | cds-NP_011677.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:799513-800304:- | gene-YGR161C_MUCL42920 | rna-NM_001181290.3_MUCL42920 | cds-NP_011677.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:808629-809420:- | gene-YGR161C_NCIM3186 | rna-NM_001181290.3_NCIM3186 | cds-NP_011677.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:779661-780452:- | gene-YGR161C_NCYC1407 | rna-NM_001181290.3_NCYC1407 | cds-NP_011677.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:798860-799651:- | gene-YGR161C_PE2H3 | rna-NM_001181290.3_PE2H3 | cds-NP_011677.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:803970-804761:- | gene-YGR161C_PE2H4 | rna-NM_001181290.3_PE2H4 | cds-NP_011677.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:808629-809420:- | gene-YGR161C_S288C | rna-NM_001181290.3_S288C | cds-NP_011677.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:43820-44611:- | gene-YGR161C_SA1 | rna-NM_001181290.3_SA1 | cds-NP_011677.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:799265-800056:- | gene-YGR161C_ThermosaccDry | rna-NM_001181290.3_ThermosaccDry | cds-NP_011677.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:904009-904800:- | gene-YGR161C_VR1 | rna-NM_001181290.3_VR1 | cds-NP_011677.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:101199-101990:- | gene-YGR161C_ZTW1 | rna-NM_001181290.3_ZTW1 | cds-NP_011677.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:788736-789527:- | gene-YGR161C_Sparadoxus | rna-NM_001181290.3_Sparadoxus | cds-NP_011677.3_Sparadoxus | 91.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |