Gene name: RTS2
Reference locus (S288C): YOR077W
Gene biotype: protein_coding
Description: Dna/rna-binding protein kin17; Basic zinc-finger protein; similar to human and mouse Kin17 proteins which are chromatin-associated proteins involved in UV response and DNA replication
Top 10 interactors (score): PRP11 (0.759); EFM3 (0.733); ALG8 (0.706); CHA4 (0.695); EFM6 (0.676); TRM13 (0.656); UFE1 (0.651); HPM1 (0.631); SIS2 (0.619); DAL4 (0.616); HBS1 (0.585); UGP1 (0.578); CDC21 (0.571); CKA2 (0.57); MSS11 (0.567); JJJ1 (0.555); SDC1 (0.532); HAP2 (0.529); NNT1 (0.505); DAL81 (0.499)
Homologues (species, bitscore): KIN (Homo sapiens, 114.8); Kin (Mus musculus, 115.9); kin (Danio rerio, 116.3); KIN (Xenopus tropicalis, 68.6); kin17 (Drosophila melanogaster, 115.9); dox-1 (Caenorhabditis elegans, 122.9); AT1G55460 (Arabidopsis thaliana, 114.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:456248-456946:+ | gene-YOR077W_AKU4011 | rna-NM_001183496.1_AKU4011 | cds-NP_014720.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:122749-123447:- | gene-YOR077W_BG1 | rna-NM_001183496.1_BG1 | cds-NP_014720.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:458966-459664:+ | gene-YOR077W_Bruggeman | rna-NM_001183496.1_Bruggeman | cds-NP_014720.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:457733-458431:+ | gene-YOR077W_CAT1 | rna-NM_001183496.1_CAT1 | cds-NP_014720.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:450967-451665:+ | gene-YOR077W_CBS1585 | rna-NM_001183496.1_CBS1585 | cds-NP_014720.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:455766-456464:+ | gene-YOR077W_CBS436 | rna-NM_001183496.1_CBS436 | cds-NP_014720.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:450257-450955:+ | gene-YOR077W_CBS6412 | rna-NM_001183496.1_CBS6412 | cds-NP_014720.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:457574-458272:+ | gene-YOR077W_CBS6413 | rna-NM_001183496.1_CBS6413 | cds-NP_014720.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:471896-472594:+ | gene-YOR077W_CENPK1137D | rna-NM_001183496.1_CENPK1137D | cds-NP_014720.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:452959-453657:+ | gene-YOR077W_EthanolRed | rna-NM_001183496.1_EthanolRed | cds-NP_014720.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:456288-456986:+ | gene-YOR077W_FaliES1 | rna-NM_001183496.1_FaliES1 | cds-NP_014720.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000231.1:15000-15698:- | gene-YOR077W_JAY291 | rna-NM_001183496.1_JAY291 | cds-NP_014720.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:463749-464447:+ | gene-YOR077W_MUCL30387 | rna-NM_001183496.1_MUCL30387 | cds-NP_014720.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:468406-469104:+ | gene-YOR077W_MUCL30388 | rna-NM_001183496.1_MUCL30388 | cds-NP_014720.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:458682-459380:+ | gene-YOR077W_MUCL39482 | rna-NM_001183496.1_MUCL39482 | cds-NP_014720.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:474227-474925:+ | gene-YOR077W_MUCL42920 | rna-NM_001183496.1_MUCL42920 | cds-NP_014720.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:471788-472486:+ | gene-YOR077W_NCIM3186 | rna-NM_001183496.1_NCIM3186 | cds-NP_014720.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:465354-466052:+ | gene-YOR077W_NCYC1407 | rna-NM_001183496.1_NCYC1407 | cds-NP_014720.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:464002-464700:+ | gene-YOR077W_PE2H3 | rna-NM_001183496.1_PE2H3 | cds-NP_014720.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:474378-475076:+ | gene-YOR077W_PE2H4 | rna-NM_001183496.1_PE2H4 | cds-NP_014720.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:471899-472597:+ | gene-YOR077W_S288C | rna-NM_001183496.1_S288C | cds-NP_014720.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000091.1:15029-15727:- | gene-YOR077W_SA1 | rna-NM_001183496.1_SA1 | cds-NP_014720.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:455444-456142:+ | gene-YOR077W_ThermosaccDry | rna-NM_001183496.1_ThermosaccDry | cds-NP_014720.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:456939-457637:+ | gene-YOR077W_VR1 | rna-NM_001183496.1_VR1 | cds-NP_014720.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:189441-190139:+ | gene-YOR077W_ZTW1 | rna-NM_001183496.1_ZTW1 | cds-NP_014720.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:461059-461766:+ | gene-YOR077W_Sparadoxus | rna-NM_001183496.1_Sparadoxus | cds-NP_014720.1_Sparadoxus | 87.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |