Gene name: RTS1
Reference locus (S288C): YOR014W
Gene biotype: protein_coding
Description: Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform; B-type regulatory subunit of protein phosphatase 2A (PP2A); Rts1p and Cdc55p are alternative regulatory subunits for PP2A catalytic subunits, Pph21p and Pph22p; PP2A-Rts1p protects cohesin when recruited by Sgo1p to the pericentromere; highly enriched at centromeres in the absence of Cdc55p; required for maintenance of septin ring organization during cytokinesis, for ring disassembly in G1 and for dephosphorylation of septin, Shs1p; homolog of the mammalian B' subunit of PP2A
Top 10 interactors (score): CDC55 (0.999); PPH21 (0.999); PPH22 (0.999); TPD3 (0.999); SGO1 (0.993); YNL217W (0.989); GLC7 (0.986); SIT4 (0.962); PPH3 (0.958); KIN4 (0.954); RRD2 (0.949); CDC28 (0.921); PPM1 (0.921); RRD1 (0.911); MIH1 (0.908); YCS4 (0.904); BUB1 (0.897); TAP42 (0.893); SWE1 (0.886); CNA1 (0.883)
Homologues (species, bitscore): PPP2R5D (Homo sapiens, 529.6); Ppp2r5d (Mus musculus, 528.9); ppp2r5d (Danio rerio, 549.3); ppp2r5e (Xenopus tropicalis, 472.2); PP2A-B (Drosophila melanogaster, 541.2); pptr-2 (Caenorhabditis elegans, 507.7); AT1G13460 (Arabidopsis thaliana, 427.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:341881-344154:+ | gene-YOR014W_AKU4011 | rna-NM_001183433.1_AKU4011 | cds-NP_014657.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:157453-159726:+ | gene-YOR014W_BG1 | rna-NM_001183433.1_BG1 | cds-NP_014657.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:344623-346896:+ | gene-YOR014W_Bruggeman | rna-NM_001183433.1_Bruggeman | cds-NP_014657.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:342755-345028:+ | gene-YOR014W_CAT1 | rna-NM_001183433.1_CAT1 | cds-NP_014657.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:336572-338845:+ | gene-YOR014W_CBS1585 | rna-NM_001183433.1_CBS1585 | cds-NP_014657.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:340932-343205:+ | gene-YOR014W_CBS436 | rna-NM_001183433.1_CBS436 | cds-NP_014657.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:335925-338198:+ | gene-YOR014W_CBS6412 | rna-NM_001183433.1_CBS6412 | cds-NP_014657.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:343300-345573:+ | gene-YOR014W_CBS6413 | rna-NM_001183433.1_CBS6413 | cds-NP_014657.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:357553-359826:+ | gene-YOR014W_CENPK1137D | rna-NM_001183433.1_CENPK1137D | cds-NP_014657.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:338581-340854:+ | gene-YOR014W_EthanolRed | rna-NM_001183433.1_EthanolRed | cds-NP_014657.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:341930-344203:+ | gene-YOR014W_FaliES1 | rna-NM_001183433.1_FaliES1 | cds-NP_014657.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:12570-14843:+ | gene-YOR014W_JAY291 | rna-NM_001183433.1_JAY291 | cds-NP_014657.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:349014-351287:+ | gene-YOR014W_MUCL30387 | rna-NM_001183433.1_MUCL30387 | cds-NP_014657.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:352446-354719:+ | gene-YOR014W_MUCL30388 | rna-NM_001183433.1_MUCL30388 | cds-NP_014657.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:344055-346328:+ | gene-YOR014W_MUCL39482 | rna-NM_001183433.1_MUCL39482 | cds-NP_014657.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:358864-361137:+ | gene-YOR014W_MUCL42920 | rna-NM_001183433.1_MUCL42920 | cds-NP_014657.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:357563-359836:+ | gene-YOR014W_NCIM3186 | rna-NM_001183433.1_NCIM3186 | cds-NP_014657.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:350756-353029:+ | gene-YOR014W_NCYC1407 | rna-NM_001183433.1_NCYC1407 | cds-NP_014657.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:349589-351862:+ | gene-YOR014W_PE2H3 | rna-NM_001183433.1_PE2H3 | cds-NP_014657.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:359968-362241:+ | gene-YOR014W_PE2H4 | rna-NM_001183433.1_PE2H4 | cds-NP_014657.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:357674-359947:+ | gene-YOR014W_S288C | rna-NM_001183433.1_S288C | cds-NP_014657.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:325439-327712:+ | gene-YOR014W_SA1 | rna-NM_001183433.1_SA1 | cds-NP_014657.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:340469-342742:+ | gene-YOR014W_ThermosaccDry | rna-NM_001183433.1_ThermosaccDry | cds-NP_014657.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:341361-343634:+ | gene-YOR014W_VR1 | rna-NM_001183433.1_VR1 | cds-NP_014657.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:75099-77372:+ | gene-YOR014W_ZTW1 | rna-NM_001183433.1_ZTW1 | cds-NP_014657.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:347400-349676:+ | gene-YOR014W_Sparadoxus | rna-NM_001183433.1_Sparadoxus | cds-NP_014657.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |