Gene name: RSO55
Reference locus (S288C): YLR281C
Gene biotype: protein_coding
Description: Uncharacterized peptide chain release factor-like protein YLR281C, mitochondrial; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR281C is not an essential gene
Top 10 interactors (score): YLR283W (0.954); COQ11 (0.941); PTH4 (0.922); YLR125W (0.915); YLR280C (0.915); FYV6 (0.846); MRPL8 (0.843); MRPS16 (0.834); MRPS9 (0.812); YPL109C (0.806); MRP7 (0.801); RPS3 (0.77); POP5 (0.763); YNL122C (0.757); MRPL39 (0.744); MRP17 (0.741); MRPL24 (0.731); RRF1 (0.726); RPL5 (0.725); MRF1 (0.72)
Homologues (species, bitscore): C12orf65 (Homo sapiens, 63.5); 2810006K23Rik (Mus musculus, 67.8); ENSDARP00000077059 (Danio rerio, 64.7); CG30100 (Drosophila melanogaster, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:653308-653775:- | gene-YLR281C_AKU4011 | rna-NM_001182168.1_AKU4011 | cds-NP_013383.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:78875-79342:+ | gene-YLR281C_BG1 | rna-NM_001182168.1_BG1 | cds-NP_013383.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:688279-688746:- | gene-YLR281C_Bruggeman | rna-NM_001182168.1_Bruggeman | cds-NP_013383.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:687100-687567:- | gene-YLR281C_CAT1 | rna-NM_001182168.1_CAT1 | cds-NP_013383.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:688245-688712:- | gene-YLR281C_CBS1585 | rna-NM_001182168.1_CBS1585 | cds-NP_013383.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:672875-673342:- | gene-YLR281C_CBS436 | rna-NM_001182168.1_CBS436 | cds-NP_013383.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:650879-651346:- | gene-YLR281C_CBS6412 | rna-NM_001182168.1_CBS6412 | cds-NP_013383.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:688909-689376:- | gene-YLR281C_CBS6413 | rna-NM_001182168.1_CBS6413 | cds-NP_013383.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:689092-689559:- | gene-YLR281C_CENPK1137D | rna-NM_001182168.1_CENPK1137D | cds-NP_013383.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:646618-647085:- | gene-YLR281C_EthanolRed | rna-NM_001182168.1_EthanolRed | cds-NP_013383.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:675818-676285:- | gene-YLR281C_FaliES1 | rna-NM_001182168.1_FaliES1 | cds-NP_013383.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:29477-29944:+ | gene-YLR281C_JAY291 | rna-NM_001182168.1_JAY291 | cds-NP_013383.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:688419-688886:- | gene-YLR281C_MUCL30387 | rna-NM_001182168.1_MUCL30387 | cds-NP_013383.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:693770-694237:- | gene-YLR281C_MUCL30388 | rna-NM_001182168.1_MUCL30388 | cds-NP_013383.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:689476-689943:- | gene-YLR281C_MUCL39482 | rna-NM_001182168.1_MUCL39482 | cds-NP_013383.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:684668-685135:- | gene-YLR281C_MUCL42920 | rna-NM_001182168.1_MUCL42920 | cds-NP_013383.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:704467-704934:- | gene-YLR281C_NCIM3186 | rna-NM_001182168.1_NCIM3186 | cds-NP_013383.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:698808-699275:- | gene-YLR281C_NCYC1407 | rna-NM_001182168.1_NCYC1407 | cds-NP_013383.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:686642-687109:- | gene-YLR281C_PE2H3 | rna-NM_001182168.1_PE2H3 | cds-NP_013383.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:686386-686853:- | gene-YLR281C_PE2H4 | rna-NM_001182168.1_PE2H4 | cds-NP_013383.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:704493-704960:- | gene-YLR281C_S288C | rna-NM_001182168.1_S288C | cds-NP_013383.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:79671-80138:+ | gene-YLR281C_SA1 | rna-NM_001182168.1_SA1 | cds-NP_013383.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:677714-678181:- | gene-YLR281C_ThermosaccDry | rna-NM_001182168.1_ThermosaccDry | cds-NP_013383.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:689593-690060:- | gene-YLR281C_VR1 | rna-NM_001182168.1_VR1 | cds-NP_013383.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:16120-16587:- | gene-YLR281C_ZTW1 | rna-NM_001182168.1_ZTW1 | cds-NP_013383.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:663759-664226:- | gene-YLR281C_Sparadoxus | rna-NM_001182168.1_Sparadoxus | cds-NP_013383.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |