RSN1 (YMR266W)


Gene profile

Gene name: RSN1
Reference locus (S288C): YMR266W
Gene biotype: protein_coding

Description: Calcium permeable stress-gated cation channel; Uncharacterized protein RSN1; Membrane protein of unknown function; overexpression suppresses NaCl sensitivity of sro7 mutant cells by restoring sodium pump (Ena1p) localization to the plasma membrane

Top 10 interactors (score): YER158C (0.749); HOR7 (0.745); YGL114W (0.71); ICY1 (0.692); YPR127W (0.691); NIT2 (0.674); AIM25 (0.583); MCD4 (0.583); INH1 (0.574); SRO7 (0.536); ALG14 (0.532); ERP1 (0.526); ALG1 (0.503); YIP3 (0.497); ERV41 (0.488); YIP1 (0.477); ALG5 (0.459); POS5 (0.455); VAN1 (0.45); YPT52 (0.45)

Homologues (species, bitscore): TMEM63B (Homo sapiens, 51.6); tmem63a (Danio rerio, 63.5); tmem63c (Xenopus tropicalis, 50.1); CG11210 (Drosophila melanogaster, 53.1); AT1G32090 (Arabidopsis thaliana, 151.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:837979-840840:+ gene-YMR266W_AKU4011 rna-NM_001182773.1_AKU4011 cds-NP_013993.1_AKU4011 98.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:113584-116445:- gene-YMR266W_BG1 rna-NM_001182773.1_BG1 cds-NP_013993.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:783187-786048:+ gene-YMR266W_Bruggeman rna-NM_001182773.1_Bruggeman cds-NP_013993.1_Bruggeman 98.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:786208-789069:+ gene-YMR266W_CAT1 rna-NM_001182773.1_CAT1 cds-NP_013993.1_CAT1 99.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:770229-773090:+ gene-YMR266W_CBS1585 rna-NM_001182773.1_CBS1585 cds-NP_013993.1_CBS1585 98.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:792154-795015:+ gene-YMR266W_CBS436 rna-NM_001182773.1_CBS436 cds-NP_013993.1_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:881784-884645:+ gene-YMR266W_CBS6412 rna-NM_001182773.1_CBS6412 cds-NP_013993.1_CBS6412 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:769331-772192:+ gene-YMR266W_CBS6413 rna-NM_001182773.1_CBS6413 cds-NP_013993.1_CBS6413 98.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:792932-795793:+ gene-YMR266W_CENPK1137D rna-NM_001182773.1_CENPK1137D cds-NP_013993.1_CENPK1137D 98.7 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:830667-833528:+ gene-YMR266W_EthanolRed rna-NM_001182773.1_EthanolRed cds-NP_013993.1_EthanolRed 98.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:776694-779555:+ gene-YMR266W_FaliES1 rna-NM_001182773.1_FaliES1 cds-NP_013993.1_FaliES1 98.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000141.1:6984-9846:- gene-YMR266W_JAY291 rna-NM_001182773.1_JAY291 cds-NP_013993.1_JAY291 99.9 100.0 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:777036-779897:+ gene-YMR266W_MUCL30387 rna-NM_001182773.1_MUCL30387 cds-NP_013993.1_MUCL30387 98.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:785629-788490:+ gene-YMR266W_MUCL30388 rna-NM_001182773.1_MUCL30388 cds-NP_013993.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:771317-774178:+ gene-YMR266W_MUCL39482 rna-NM_001182773.1_MUCL39482 cds-NP_013993.1_MUCL39482 98.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:779364-782225:+ gene-YMR266W_MUCL42920 rna-NM_001182773.1_MUCL42920 cds-NP_013993.1_MUCL42920 98.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:798472-801333:+ gene-YMR266W_NCIM3186 rna-NM_001182773.1_NCIM3186 cds-NP_013993.1_NCIM3186 98.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:770941-773802:+ gene-YMR266W_NCYC1407 rna-NM_001182773.1_NCYC1407 cds-NP_013993.1_NCYC1407 98.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:780927-783788:+ gene-YMR266W_PE2H3 rna-NM_001182773.1_PE2H3 cds-NP_013993.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:781974-784835:+ gene-YMR266W_PE2H4 rna-NM_001182773.1_PE2H4 cds-NP_013993.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:798518-801379:+ gene-YMR266W_S288C rna-NM_001182773.1_S288C cds-NP_013993.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:7056-9917:- gene-YMR266W_SA1 rna-NM_001182773.1_SA1 cds-NP_013993.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:772863-775724:+ gene-YMR266W_ThermosaccDry rna-NM_001182773.1_ThermosaccDry cds-NP_013993.1_ThermosaccDry 98.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:785464-788325:+ gene-YMR266W_VR1 rna-NM_001182773.1_VR1 cds-NP_013993.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:188063-190924:+ gene-YMR266W_ZTW1 rna-NM_001182773.1_ZTW1 cds-NP_013993.1_ZTW1 98.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:791186-794047:+ gene-YMR266W_Sparadoxus rna-NM_001182773.1_Sparadoxus cds-NP_013993.1_Sparadoxus 91.2 99.8 Verified 1 1 1 False True False False False

Additional files