Gene name: RSM7
Reference locus (S288C): YJR113C
Gene biotype: protein_coding
Description: Mitochondrial 37s ribosomal protein rsm7; Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S7 ribosomal protein
Top 10 interactors (score): MRPL8 (0.999); MRPS18 (0.999); MRP2 (0.999); MRPL17 (0.999); RSM18 (0.999); RSM24 (0.999); MRP4 (0.999); MRPL4 (0.999); MRPS28 (0.999); MRPS8 (0.999); MRPL32 (0.999); MRP17 (0.999); MRPS9 (0.999); MRPS16 (0.999); RSM23 (0.999); MRPS12 (0.999); MRPS5 (0.999); IMG1 (0.999); RML2 (0.999); RSM10 (0.999)
Homologues (species, bitscore): RPS7.1 (Arabidopsis thaliana, 73.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:609747-610490:- | gene-YJR113C_AKU4011 | rna-NM_001181771.1_AKU4011 | cds-NP_012647.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:63165-63908:+ | gene-YJR113C_BG1 | rna-NM_001181771.1_BG1 | cds-NP_012647.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:625477-626220:- | gene-YJR113C_Bruggeman | rna-NM_001181771.1_Bruggeman | cds-NP_012647.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:629227-629970:- | gene-YJR113C_CAT1 | rna-NM_001181771.1_CAT1 | cds-NP_012647.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:621801-622544:- | gene-YJR113C_CBS1585 | rna-NM_001181771.1_CBS1585 | cds-NP_012647.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:640670-641413:- | gene-YJR113C_CBS436 | rna-NM_001181771.1_CBS436 | cds-NP_012647.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:608565-609308:- | gene-YJR113C_CBS6412 | rna-NM_001181771.1_CBS6412 | cds-NP_012647.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:611221-611964:- | gene-YJR113C_CBS6413 | rna-NM_001181771.1_CBS6413 | cds-NP_012647.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:620549-621292:- | gene-YJR113C_CENPK1137D | rna-NM_001181771.1_CENPK1137D | cds-NP_012647.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:614166-614909:- | gene-YJR113C_EthanolRed | rna-NM_001181771.1_EthanolRed | cds-NP_012647.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:625632-626375:- | gene-YJR113C_FaliES1 | rna-NM_001181771.1_FaliES1 | cds-NP_012647.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:62771-63514:+ | gene-YJR113C_JAY291 | rna-NM_001181771.1_JAY291 | cds-NP_012647.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:624302-625045:- | gene-YJR113C_MUCL30387 | rna-NM_001181771.1_MUCL30387 | cds-NP_012647.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:621991-622734:- | gene-YJR113C_MUCL30388 | rna-NM_001181771.1_MUCL30388 | cds-NP_012647.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:615271-616014:- | gene-YJR113C_MUCL39482 | rna-NM_001181771.1_MUCL39482 | cds-NP_012647.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:619777-620520:- | gene-YJR113C_MUCL42920 | rna-NM_001181771.1_MUCL42920 | cds-NP_012647.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:638211-638954:- | gene-YJR113C_NCIM3186 | rna-NM_001181771.1_NCIM3186 | cds-NP_012647.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:612831-613574:- | gene-YJR113C_NCYC1407 | rna-NM_001181771.1_NCYC1407 | cds-NP_012647.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:631000-631743:- | gene-YJR113C_PE2H3 | rna-NM_001181771.1_PE2H3 | cds-NP_012647.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:624689-625432:- | gene-YJR113C_PE2H4 | rna-NM_001181771.1_PE2H4 | cds-NP_012647.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:638232-638975:- | gene-YJR113C_S288C | rna-NM_001181771.1_S288C | cds-NP_012647.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:97074-97817:- | gene-YJR113C_SA1 | rna-NM_001181771.1_SA1 | cds-NP_012647.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:619566-620309:- | gene-YJR113C_ThermosaccDry | rna-NM_001181771.1_ThermosaccDry | cds-NP_012647.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:621944-622687:- | gene-YJR113C_VR1 | rna-NM_001181771.1_VR1 | cds-NP_012647.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:598929-599672:- | gene-YJR113C_ZTW1 | rna-NM_001181771.1_ZTW1 | cds-NP_012647.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:633107-633850:- | gene-YJR113C_Sparadoxus | rna-NM_001181771.1_Sparadoxus | cds-NP_012647.1_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |