Gene name: RSM27
Reference locus (S288C): YGR215W
Gene biotype: protein_coding
Description: Mitochondrial 37s ribosomal protein rsm27; Mitochondrial ribosomal protein of the small subunit
Top 10 interactors (score): MRP17 (0.999); MRPS9 (0.999); MRPS28 (0.999); MRPS16 (0.999); RSM23 (0.999); RSM18 (0.999); MRPS5 (0.999); RSM19 (0.999); MRP10 (0.999); MRPL24 (0.999); MRP2 (0.999); MRPS18 (0.998); MRPS8 (0.998); MRP21 (0.998); MRP4 (0.998); RSM7 (0.998); MRP51 (0.997); MRPL4 (0.997); RSM24 (0.997); NAM9 (0.997)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:887695-888027:+ | gene-YGR215W_AKU4011 | rna-NM_001181344.3_AKU4011 | cds-NP_011731.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:168074-168406:+ | gene-YGR215W_BG1 | rna-NM_001181344.3_BG1 | cds-NP_011731.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:895889-896221:+ | gene-YGR215W_Bruggeman | rna-NM_001181344.3_Bruggeman | cds-NP_011731.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:893888-894220:+ | gene-YGR215W_CAT1 | rna-NM_001181344.3_CAT1 | cds-NP_011731.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:891135-891467:+ | gene-YGR215W_CBS1585 | rna-NM_001181344.3_CBS1585 | cds-NP_011731.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:894482-894814:+ | gene-YGR215W_CBS436 | rna-NM_001181344.3_CBS436 | cds-NP_011731.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:882005-882337:+ | gene-YGR215W_CBS6412 | rna-NM_001181344.3_CBS6412 | cds-NP_011731.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:888064-888396:+ | gene-YGR215W_CBS6413 | rna-NM_001181344.3_CBS6413 | cds-NP_011731.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:921884-922216:+ | gene-YGR215W_CENPK1137D | rna-NM_001181344.3_CENPK1137D | cds-NP_011731.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:876515-876847:+ | gene-YGR215W_EthanolRed | rna-NM_001181344.3_EthanolRed | cds-NP_011731.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:880906-881238:+ | gene-YGR215W_FaliES1 | rna-NM_001181344.3_FaliES1 | cds-NP_011731.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000282.1:565-897:+ | gene-YGR215W_JAY291 | rna-NM_001181344.3_JAY291 | cds-NP_011731.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:893373-893706:+ | gene-YGR215W_MUCL30387 | rna-NM_001181344.3_MUCL30387 | cds-NP_011731.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:893059-893392:+ | gene-YGR215W_MUCL30388 | rna-NM_001181344.3_MUCL30388 | cds-NP_011731.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:886211-886543:+ | gene-YGR215W_MUCL39482 | rna-NM_001181344.3_MUCL39482 | cds-NP_011731.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:903752-904084:+ | gene-YGR215W_MUCL42920 | rna-NM_001181344.3_MUCL42920 | cds-NP_011731.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:922175-922507:+ | gene-YGR215W_NCIM3186 | rna-NM_001181344.3_NCIM3186 | cds-NP_011731.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:881867-882199:+ | gene-YGR215W_NCYC1407 | rna-NM_001181344.3_NCYC1407 | cds-NP_011731.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:906469-906801:+ | gene-YGR215W_PE2H3 | rna-NM_001181344.3_PE2H3 | cds-NP_011731.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:911579-911911:+ | gene-YGR215W_PE2H4 | rna-NM_001181344.3_PE2H4 | cds-NP_011731.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:922175-922507:+ | gene-YGR215W_S288C | rna-NM_001181344.3_S288C | cds-NP_011731.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:78884-79216:- | gene-YGR215W_SA1 | rna-NM_001181344.3_SA1 | cds-NP_011731.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:901417-901749:+ | gene-YGR215W_ThermosaccDry | rna-NM_001181344.3_ThermosaccDry | cds-NP_011731.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1005897-1006229:+ | gene-YGR215W_VR1 | rna-NM_001181344.3_VR1 | cds-NP_011731.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:202858-203190:+ | gene-YGR215W_ZTW1 | rna-NM_001181344.3_ZTW1 | cds-NP_011731.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:893343-893675:+ | gene-YGR215W_Sparadoxus | rna-NM_001181344.3_Sparadoxus | cds-NP_011731.3_Sparadoxus | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |