Gene name: RSM25
Reference locus (S288C): YIL093C
Gene biotype: protein_coding
Description: Mitochondrial 37s ribosomal protein rsm25; Mitochondrial ribosomal protein of the small subunit
Top 10 interactors (score): RSM10 (0.999); MRPS5 (0.998); RSM18 (0.997); MRP21 (0.997); RSM24 (0.997); RSM26 (0.997); MRPS17 (0.996); MRP1 (0.996); MRP4 (0.996); RSM7 (0.996); MRPS9 (0.995); MRPS28 (0.995); MRPS16 (0.995); RSM27 (0.995); MRP10 (0.995); PET123 (0.995); MRPS8 (0.995); MRPS18 (0.995); RSM19 (0.994); RSM23 (0.994)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:189410-190204:- | gene-YIL093C_AKU4011 | rna-NM_001179441.3_AKU4011 | cds-NP_012173.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:52405-53199:- | gene-YIL093C_BG1 | rna-NM_001179441.3_BG1 | cds-NP_012173.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:194122-194916:- | gene-YIL093C_Bruggeman | rna-NM_001179441.3_Bruggeman | cds-NP_012173.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:186157-186951:- | gene-YIL093C_CAT1 | rna-NM_001179441.3_CAT1 | cds-NP_012173.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:189667-190461:- | gene-YIL093C_CBS1585 | rna-NM_001179441.3_CBS1585 | cds-NP_012173.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:180662-181456:- | gene-YIL093C_CBS436 | rna-NM_001179441.3_CBS436 | cds-NP_012173.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:187047-187841:- | gene-YIL093C_CBS6412 | rna-NM_001179441.3_CBS6412 | cds-NP_012173.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:180699-181493:- | gene-YIL093C_CBS6413 | rna-NM_001179441.3_CBS6413 | cds-NP_012173.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:179701-180495:- | gene-YIL093C_CENPK1137D | rna-NM_001179441.3_CENPK1137D | cds-NP_012173.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:174632-175426:- | gene-YIL093C_EthanolRed | rna-NM_001179441.3_EthanolRed | cds-NP_012173.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:190627-191421:- | gene-YIL093C_FaliES1 | rna-NM_001179441.3_FaliES1 | cds-NP_012173.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000025.1:37038-37832:+ | gene-YIL093C_JAY291 | rna-NM_001179441.3_JAY291 | cds-NP_012173.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:191834-192628:- | gene-YIL093C_MUCL30387 | rna-NM_001179441.3_MUCL30387 | cds-NP_012173.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:189631-190425:- | gene-YIL093C_MUCL30388 | rna-NM_001179441.3_MUCL30388 | cds-NP_012173.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:190514-191308:- | gene-YIL093C_MUCL39482 | rna-NM_001179441.3_MUCL39482 | cds-NP_012173.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:193775-194569:- | gene-YIL093C_MUCL42920 | rna-NM_001179441.3_MUCL42920 | cds-NP_012173.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:187990-188784:- | gene-YIL093C_NCIM3186 | rna-NM_001179441.3_NCIM3186 | cds-NP_012173.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:194557-195351:- | gene-YIL093C_NCYC1407 | rna-NM_001179441.3_NCYC1407 | cds-NP_012173.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:189151-189945:- | gene-YIL093C_PE2H3 | rna-NM_001179441.3_PE2H3 | cds-NP_012173.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:183102-183896:- | gene-YIL093C_PE2H4 | rna-NM_001179441.3_PE2H4 | cds-NP_012173.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:187990-188784:- | gene-YIL093C_S288C | rna-NM_001179441.3_S288C | cds-NP_012173.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000111.1:16485-17279:+ | gene-YIL093C_SA1 | rna-NM_001179441.3_SA1 | cds-NP_012173.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:189294-190088:- | gene-YIL093C_ThermosaccDry | rna-NM_001179441.3_ThermosaccDry | cds-NP_012173.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:186964-187758:- | gene-YIL093C_VR1 | rna-NM_001179441.3_VR1 | cds-NP_012173.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:164228-165022:- | gene-YIL093C_ZTW1 | rna-NM_001179441.3_ZTW1 | cds-NP_012173.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:188194-188988:- | gene-YIL093C_Sparadoxus | rna-NM_001179441.3_Sparadoxus | cds-NP_012173.3_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |