Gene name: RSM22
Reference locus (S288C): YKL155C
Gene biotype: protein_coding
Description: Probable s-adenosyl-l-methionine-dependent rna methyltransferase rsm22, mitochondrial; Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent RNA methyltransferase
Top 10 interactors (score): MRPS5 (0.996); RSM10 (0.993); RSM27 (0.99); RSM23 (0.987); RSM24 (0.986); MRPS17 (0.986); RSM18 (0.986); MRPS28 (0.982); RSM25 (0.982); RSM7 (0.981); MRP4 (0.98); MRPS16 (0.978); RSM19 (0.977); PET123 (0.977); NAM9 (0.969); PPE1 (0.968); RSM26 (0.966); MRP51 (0.965); MRPS9 (0.962); MRPS18 (0.957)
Homologues (species, bitscore): mettl17 (Danio rerio, 50.1); mettl17 (Xenopus tropicalis, 50.8); CG13126 (Drosophila melanogaster, 54.7); AT1G64600 (Arabidopsis thaliana, 65.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:146347-148233:- | gene-YKL155C_AKU4011 | rna-NM_001179721.1_AKU4011 | cds-NP_012767.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:122920-124806:- | gene-YKL155C_BG1 | rna-NM_001179721.1_BG1 | cds-NP_012767.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:164005-165891:- | gene-YKL155C_Bruggeman | rna-NM_001179721.1_Bruggeman | cds-NP_012767.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:158821-160707:- | gene-YKL155C_CAT1 | rna-NM_001179721.1_CAT1 | cds-NP_012767.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:158570-160456:- | gene-YKL155C_CBS1585 | rna-NM_001179721.1_CBS1585 | cds-NP_012767.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:157164-159050:- | gene-YKL155C_CBS436 | rna-NM_001179721.1_CBS436 | cds-NP_012767.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:143596-145482:- | gene-YKL155C_CBS6412 | rna-NM_001179721.1_CBS6412 | cds-NP_012767.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:159042-160928:- | gene-YKL155C_CBS6413 | rna-NM_001179721.1_CBS6413 | cds-NP_012767.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:159103-160989:- | gene-YKL155C_CENPK1137D | rna-NM_001179721.1_CENPK1137D | cds-NP_012767.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:157093-158979:- | gene-YKL155C_EthanolRed | rna-NM_001179721.1_EthanolRed | cds-NP_012767.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:157905-159791:- | gene-YKL155C_FaliES1 | rna-NM_001179721.1_FaliES1 | cds-NP_012767.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000239.2:16871-18757:- | gene-YKL155C_JAY291 | rna-NM_001179721.1_JAY291 | cds-NP_012767.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:166103-167989:- | gene-YKL155C_MUCL30387 | rna-NM_001179721.1_MUCL30387 | cds-NP_012767.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:160457-162343:- | gene-YKL155C_MUCL30388 | rna-NM_001179721.1_MUCL30388 | cds-NP_012767.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:158376-160262:- | gene-YKL155C_MUCL39482 | rna-NM_001179721.1_MUCL39482 | cds-NP_012767.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:162788-164674:- | gene-YKL155C_MUCL42920 | rna-NM_001179721.1_MUCL42920 | cds-NP_012767.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:159445-161331:- | gene-YKL155C_NCIM3186 | rna-NM_001179721.1_NCIM3186 | cds-NP_012767.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:158573-160459:- | gene-YKL155C_NCYC1407 | rna-NM_001179721.1_NCYC1407 | cds-NP_012767.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:165648-167534:- | gene-YKL155C_PE2H3 | rna-NM_001179721.1_PE2H3 | cds-NP_012767.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:161942-163828:- | gene-YKL155C_PE2H4 | rna-NM_001179721.1_PE2H4 | cds-NP_012767.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:159456-161342:- | gene-YKL155C_S288C | rna-NM_001179721.1_S288C | cds-NP_012767.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:75873-77759:- | gene-YKL155C_SA1 | rna-NM_001179721.1_SA1 | cds-NP_012767.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:158605-160491:- | gene-YKL155C_ThermosaccDry | rna-NM_001179721.1_ThermosaccDry | cds-NP_012767.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:157441-159327:- | gene-YKL155C_VR1 | rna-NM_001179721.1_VR1 | cds-NP_012767.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:157127-159013:- | gene-YKL155C_ZTW1 | rna-NM_001179721.1_ZTW1 | cds-NP_012767.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:173307-175194:- | gene-YKL155C_Sparadoxus | rna-NM_001179721.1_Sparadoxus | cds-NP_012767.1_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |