Gene name: RSM19
Reference locus (S288C): YNR037C
Gene biotype: protein_coding
Description: Mitochondrial 37s ribosomal protein rsm19; Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S19 ribosomal protein
Top 10 interactors (score): MRP10 (0.999); MRPS28 (0.999); MRPS8 (0.999); RSM23 (0.999); MRPS16 (0.999); RSM27 (0.999); MRPS9 (0.999); MRP17 (0.999); RSM7 (0.999); RML2 (0.999); RSM10 (0.999); MRPS12 (0.999); MRPS5 (0.999); MRP4 (0.999); MRPL8 (0.999); MRPS18 (0.999); MRP2 (0.999); RSM18 (0.999); MRPL22 (0.998); MRPL10 (0.998)
Homologues (species, bitscore): rps15 (Xenopus tropicalis, 50.4); At5g47320 (Arabidopsis thaliana, 61.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:678700-678975:- | gene-YNR037C_AKU4011 | rna-NM_001183214.3_AKU4011 | cds-NP_014435.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:586612-586887:- | gene-YNR037C_BG1 | rna-NM_001183214.3_BG1 | cds-NP_014435.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:696148-696423:- | gene-YNR037C_Bruggeman | rna-NM_001183214.3_Bruggeman | cds-NP_014435.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:730413-730688:- | gene-YNR037C_CAT1 | rna-NM_001183214.3_CAT1 | cds-NP_014435.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:684475-684750:- | gene-YNR037C_CBS1585 | rna-NM_001183214.3_CBS1585 | cds-NP_014435.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:746114-746389:- | gene-YNR037C_CBS436 | rna-NM_001183214.3_CBS436 | cds-NP_014435.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:673640-673915:- | gene-YNR037C_CBS6412 | rna-NM_001183214.3_CBS6412 | cds-NP_014435.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:675346-675621:- | gene-YNR037C_CBS6413 | rna-NM_001183214.3_CBS6413 | cds-NP_014435.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:688801-689076:- | gene-YNR037C_CENPK1137D | rna-NM_001183214.3_CENPK1137D | cds-NP_014435.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:680369-680644:- | gene-YNR037C_EthanolRed | rna-NM_001183214.3_EthanolRed | cds-NP_014435.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:671572-671847:- | gene-YNR037C_FaliES1 | rna-NM_001183214.3_FaliES1 | cds-NP_014435.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:30906-31181:+ | gene-YNR037C_JAY291 | rna-NM_001183214.3_JAY291 | cds-NP_014435.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:693907-694182:- | gene-YNR037C_MUCL30387 | rna-NM_001183214.3_MUCL30387 | cds-NP_014435.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:734726-735001:- | gene-YNR037C_MUCL30388 | rna-NM_001183214.3_MUCL30388 | cds-NP_014435.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:675944-676219:- | gene-YNR037C_MUCL39482 | rna-NM_001183214.3_MUCL39482 | cds-NP_014435.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:680111-680386:- | gene-YNR037C_MUCL42920 | rna-NM_001183214.3_MUCL42920 | cds-NP_014435.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:695021-695296:- | gene-YNR037C_NCIM3186 | rna-NM_001183214.3_NCIM3186 | cds-NP_014435.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:678460-678735:- | gene-YNR037C_NCYC1407 | rna-NM_001183214.3_NCYC1407 | cds-NP_014435.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:679548-679823:- | gene-YNR037C_PE2H3 | rna-NM_001183214.3_PE2H3 | cds-NP_014435.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:680866-681141:- | gene-YNR037C_PE2H4 | rna-NM_001183214.3_PE2H4 | cds-NP_014435.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:695052-695327:- | gene-YNR037C_S288C | rna-NM_001183214.3_S288C | cds-NP_014435.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:31054-31329:+ | gene-YNR037C_SA1 | rna-NM_001183214.3_SA1 | cds-NP_014435.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:671909-672184:- | gene-YNR037C_ThermosaccDry | rna-NM_001183214.3_ThermosaccDry | cds-NP_014435.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:713924-714199:- | gene-YNR037C_VR1 | rna-NM_001183214.3_VR1 | cds-NP_014435.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:581311-581586:- | gene-YNR037C_ZTW1 | rna-NM_001183214.3_ZTW1 | cds-NP_014435.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:685985-686260:- | gene-YNR037C_Sparadoxus | rna-NM_001183214.3_Sparadoxus | cds-NP_014435.3_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |