Gene name: RSM18
Reference locus (S288C): YER050C
Gene biotype: protein_coding
Description: 37S ribosomal protein RSM18, mitochondrial; Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S18 ribosomal protein
Top 10 interactors (score): RSM19 (0.999); MRPS12 (0.999); RSM27 (0.999); MRPS16 (0.999); RSM23 (0.999); RSM7 (0.999); MRP17 (0.999); MRPS9 (0.999); MRPL32 (0.999); YML6 (0.999); RSM24 (0.999); MRP2 (0.999); MRPS18 (0.999); MRP10 (0.999); NAM9 (0.999); MRPS5 (0.999); RML2 (0.999); MRPL16 (0.999); MRPL4 (0.999); RSM10 (0.999)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:247773-248189:- | gene-YER050C_AKU4011 | rna-NM_001178941.3_AKU4011 | cds-NP_010970.4_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:177618-178034:+ | gene-YER050C_BG1 | rna-NM_001178941.3_BG1 | cds-NP_010970.4_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:256564-256980:- | gene-YER050C_Bruggeman | rna-NM_001178941.3_Bruggeman | cds-NP_010970.4_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:250715-251131:- | gene-YER050C_CAT1 | rna-NM_001178941.3_CAT1 | cds-NP_010970.4_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:247619-248035:- | gene-YER050C_CBS1585 | rna-NM_001178941.3_CBS1585 | cds-NP_010970.4_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:249534-249950:- | gene-YER050C_CBS436 | rna-NM_001178941.3_CBS436 | cds-NP_010970.4_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:247088-247504:- | gene-YER050C_CBS6412 | rna-NM_001178941.3_CBS6412 | cds-NP_010970.4_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:253113-253529:- | gene-YER050C_CBS6413 | rna-NM_001178941.3_CBS6413 | cds-NP_010970.4_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:251832-252248:- | gene-YER050C_CENPK1137D | rna-NM_001178941.3_CENPK1137D | cds-NP_010970.4_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:248099-248515:- | gene-YER050C_EthanolRed | rna-NM_001178941.3_EthanolRed | cds-NP_010970.4_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:248569-248985:- | gene-YER050C_FaliES1 | rna-NM_001178941.3_FaliES1 | cds-NP_010970.4_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000192.1:46326-46742:- | gene-YER050C_JAY291 | rna-NM_001178941.3_JAY291 | cds-NP_010970.4_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:252022-252438:- | gene-YER050C_MUCL30387 | rna-NM_001178941.3_MUCL30387 | cds-NP_010970.4_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:248191-248607:- | gene-YER050C_MUCL30388 | rna-NM_001178941.3_MUCL30388 | cds-NP_010970.4_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:246641-247057:- | gene-YER050C_MUCL39482 | rna-NM_001178941.3_MUCL39482 | cds-NP_010970.4_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:253705-254121:- | gene-YER050C_MUCL42920 | rna-NM_001178941.3_MUCL42920 | cds-NP_010970.4_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:253970-254386:- | gene-YER050C_NCIM3186 | rna-NM_001178941.3_NCIM3186 | cds-NP_010970.4_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:251723-252139:- | gene-YER050C_NCYC1407 | rna-NM_001178941.3_NCYC1407 | cds-NP_010970.4_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:262351-262767:- | gene-YER050C_PE2H3 | rna-NM_001178941.3_PE2H3 | cds-NP_010970.4_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:252292-252708:- | gene-YER050C_PE2H4 | rna-NM_001178941.3_PE2H4 | cds-NP_010970.4_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:253971-254387:- | gene-YER050C_S288C | rna-NM_001178941.3_S288C | cds-NP_010970.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:40439-40855:- | gene-YER050C_SA1 | rna-NM_001178941.3_SA1 | cds-NP_010970.4_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:249359-249775:- | gene-YER050C_ThermosaccDry | rna-NM_001178941.3_ThermosaccDry | cds-NP_010970.4_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:248428-248844:- | gene-YER050C_VR1 | rna-NM_001178941.3_VR1 | cds-NP_010970.4_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:246547-246963:- | gene-YER050C_ZTW1 | rna-NM_001178941.3_ZTW1 | cds-NP_010970.4_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:250407-250823:- | gene-YER050C_Sparadoxus | rna-NM_001178941.3_Sparadoxus | cds-NP_010970.4_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |