Gene name: RSF1
Reference locus (S288C): YMR030W
Gene biotype: protein_coding
Description: Respiration factor 1; Protein required for respiratory growth; localized to both the nucleus and mitochondrion; may interact with transcription factors to mediate the transition to respiratory growth and activate transcription of nuclear and mitochondrial genes
Top 10 interactors (score): RME1 (0.819); IME1 (0.775); WTM2 (0.746); ENV11 (0.655); PRD1 (0.653); WTM1 (0.618); SWS2 (0.597); SPS2 (0.596); VPS73 (0.571); HOS4 (0.567); SPO74 (0.566); RSF2 (0.526); RIM4 (0.525); PIG1 (0.525); VID22 (0.487); PUN1 (0.485); TAO3 (0.481); SAW1 (0.481); RAD16 (0.456); PCM1 (0.453)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:380391-381521:+ | gene-YMR030W_AKU4011 | rna-NM_001182526.1_AKU4011 | cds-NP_013743.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:161333-162463:- | gene-YMR030W_BG1 | rna-NM_001182526.1_BG1 | cds-NP_013743.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:320331-321461:+ | gene-YMR030W_Bruggeman | rna-NM_001182526.1_Bruggeman | cds-NP_013743.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:322843-323973:+ | gene-YMR030W_CAT1 | rna-NM_001182526.1_CAT1 | cds-NP_013743.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:313330-314460:+ | gene-YMR030W_CBS1585 | rna-NM_001182526.1_CBS1585 | cds-NP_013743.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:318882-320012:+ | gene-YMR030W_CBS436 | rna-NM_001182526.1_CBS436 | cds-NP_013743.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:426734-427864:+ | gene-YMR030W_CBS6412 | rna-NM_001182526.1_CBS6412 | cds-NP_013743.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:312588-313718:+ | gene-YMR030W_CBS6413 | rna-NM_001182526.1_CBS6413 | cds-NP_013743.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:325522-326652:+ | gene-YMR030W_CENPK1137D | rna-NM_001182526.1_CENPK1137D | cds-NP_013743.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:313164-314294:+ | gene-YMR030W_EthanolRed | rna-NM_001182526.1_EthanolRed | cds-NP_013743.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:316346-317476:+ | gene-YMR030W_FaliES1 | rna-NM_001182526.1_FaliES1 | cds-NP_013743.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:119464-120594:- | gene-YMR030W_JAY291 | rna-NM_001182526.1_JAY291 | cds-NP_013743.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:318290-319420:+ | gene-YMR030W_MUCL30387 | rna-NM_001182526.1_MUCL30387 | cds-NP_013743.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:322716-323845:+ | gene-YMR030W_MUCL30388 | rna-NM_001182526.1_MUCL30388 | cds-NP_013743.1_MUCL30388 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:313615-314745:+ | gene-YMR030W_MUCL39482 | rna-NM_001182526.1_MUCL39482 | cds-NP_013743.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:319435-320565:+ | gene-YMR030W_MUCL42920 | rna-NM_001182526.1_MUCL42920 | cds-NP_013743.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:330747-331877:+ | gene-YMR030W_NCIM3186 | rna-NM_001182526.1_NCIM3186 | cds-NP_013743.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:313532-314662:+ | gene-YMR030W_NCYC1407 | rna-NM_001182526.1_NCYC1407 | cds-NP_013743.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:319478-320608:+ | gene-YMR030W_PE2H3 | rna-NM_001182526.1_PE2H3 | cds-NP_013743.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:325573-326703:+ | gene-YMR030W_PE2H4 | rna-NM_001182526.1_PE2H4 | cds-NP_013743.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:330793-331923:+ | gene-YMR030W_S288C | rna-NM_001182526.1_S288C | cds-NP_013743.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:206341-207471:- | gene-YMR030W_SA1 | rna-NM_001182526.1_SA1 | cds-NP_013743.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:313415-314545:+ | gene-YMR030W_ThermosaccDry | rna-NM_001182526.1_ThermosaccDry | cds-NP_013743.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:318117-319247:+ | gene-YMR030W_VR1 | rna-NM_001182526.1_VR1 | cds-NP_013743.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:292429-293559:+ | gene-YMR030W_ZTW1 | rna-NM_001182526.1_ZTW1 | cds-NP_013743.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:326337-327497:+ | gene-YMR030W_Sparadoxus | rna-NM_001182526.1_Sparadoxus | cds-NP_013743.1_Sparadoxus | 87.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |