Gene name: RSC58
Reference locus (S288C): YLR033W
Gene biotype: protein_coding
Description: Chromatin structure-remodeling complex protein RSC58; Component of the RSC chromatin remodeling complex; RSC functions in transcriptional regulation and elongation, chromosome stability, and establishing sister chromatid cohesion; involved in telomere maintenance
Top 10 interactors (score): RSC3 (0.999); RSC9 (0.999); RSC2 (0.999); STH1 (0.999); RSC4 (0.999); HTL1 (0.999); RSC6 (0.999); ARP7 (0.999); RSC8 (0.999); NPL6 (0.999); ARP9 (0.999); RTT102 (0.999); RSC30 (0.998); RSC1 (0.997); LDB7 (0.996); SFH1 (0.995); YDR008C (0.817); ISW1 (0.772); NHP6B (0.763); SPT15 (0.713)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:196695-198203:+ | gene-YLR033W_AKU4011 | rna-NM_001181920.1_AKU4011 | cds-NP_013133.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:159976-161484:+ | gene-YLR033W_BG1 | rna-NM_001181920.1_BG1 | cds-NP_013133.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:207088-208596:+ | gene-YLR033W_Bruggeman | rna-NM_001181920.1_Bruggeman | cds-NP_013133.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:207412-208920:+ | gene-YLR033W_CAT1 | rna-NM_001181920.1_CAT1 | cds-NP_013133.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:204321-205829:+ | gene-YLR033W_CBS1585 | rna-NM_001181920.1_CBS1585 | cds-NP_013133.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:194952-196460:+ | gene-YLR033W_CBS436 | rna-NM_001181920.1_CBS436 | cds-NP_013133.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:202730-204238:+ | gene-YLR033W_CBS6412 | rna-NM_001181920.1_CBS6412 | cds-NP_013133.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:204583-206091:+ | gene-YLR033W_CBS6413 | rna-NM_001181920.1_CBS6413 | cds-NP_013133.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:193994-195502:+ | gene-YLR033W_CENPK1137D | rna-NM_001181920.1_CENPK1137D | cds-NP_013133.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:196706-198214:+ | gene-YLR033W_EthanolRed | rna-NM_001181920.1_EthanolRed | cds-NP_013133.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:196616-198124:+ | gene-YLR033W_FaliES1 | rna-NM_001181920.1_FaliES1 | cds-NP_013133.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000431.1:40470-41978:+ | gene-YLR033W_JAY291 | rna-NM_001181920.1_JAY291 | cds-NP_013133.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:204441-205949:+ | gene-YLR033W_MUCL30387 | rna-NM_001181920.1_MUCL30387 | cds-NP_013133.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:211444-212952:+ | gene-YLR033W_MUCL30388 | rna-NM_001181920.1_MUCL30388 | cds-NP_013133.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:204816-206324:+ | gene-YLR033W_MUCL39482 | rna-NM_001181920.1_MUCL39482 | cds-NP_013133.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:204720-206228:+ | gene-YLR033W_MUCL42920 | rna-NM_001181920.1_MUCL42920 | cds-NP_013133.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:208735-210243:+ | gene-YLR033W_NCIM3186 | rna-NM_001181920.1_NCIM3186 | cds-NP_013133.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:196875-198383:+ | gene-YLR033W_NCYC1407 | rna-NM_001181920.1_NCYC1407 | cds-NP_013133.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:202750-204258:+ | gene-YLR033W_PE2H3 | rna-NM_001181920.1_PE2H3 | cds-NP_013133.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:202491-203999:+ | gene-YLR033W_PE2H4 | rna-NM_001181920.1_PE2H4 | cds-NP_013133.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:208761-210269:+ | gene-YLR033W_S288C | rna-NM_001181920.1_S288C | cds-NP_013133.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:40598-42106:+ | gene-YLR033W_SA1 | rna-NM_001181920.1_SA1 | cds-NP_013133.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:196782-198290:+ | gene-YLR033W_ThermosaccDry | rna-NM_001181920.1_ThermosaccDry | cds-NP_013133.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:210200-211708:+ | gene-YLR033W_VR1 | rna-NM_001181920.1_VR1 | cds-NP_013133.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:196148-197656:+ | gene-YLR033W_ZTW1 | rna-NM_001181920.1_ZTW1 | cds-NP_013133.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:204951-206450:+ | gene-YLR033W_Sparadoxus | rna-NM_001181920.1_Sparadoxus | cds-NP_013133.1_Sparadoxus | 89.8 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |