Gene name: RSC3
Reference locus (S288C): YDR303C
Gene biotype: protein_coding
Description: Chromatin structure-remodeling complex protein RSC3; Component of the RSC chromatin remodeling complex; essential gene required for maintenance of proper ploidy and regulation of ribosomal protein genes and the cell wall/stress response; RSC3 has a paralog, RSC30, that arose from the whole genome duplication
Top 10 interactors (score): RSC58 (0.999); RSC9 (0.999); STH1 (0.999); RSC8 (0.999); RSC2 (0.999); NPL6 (0.999); RSC6 (0.999); RSC4 (0.999); ARP9 (0.998); ARP7 (0.998); SFH1 (0.997); LDB7 (0.997); HTL1 (0.997); RSC30 (0.996); RSC1 (0.996); RTT102 (0.995); REB1 (0.969); RFX1 (0.8); HHT2 (0.774); TBF1 (0.76)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1020742-1023399:- | gene-YDR303C_AKU4011 | rna-NM_001180611.3_AKU4011 | cds-NP_010589.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:108177-110834:+ | gene-YDR303C_BG1 | rna-NM_001180611.3_BG1 | cds-NP_010589.3_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1048009-1050666:- | gene-YDR303C_Bruggeman | rna-NM_001180611.3_Bruggeman | cds-NP_010589.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1035006-1037663:- | gene-YDR303C_CAT1 | rna-NM_001180611.3_CAT1 | cds-NP_010589.3_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1015187-1017844:- | gene-YDR303C_CBS1585 | rna-NM_001180611.3_CBS1585 | cds-NP_010589.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1033557-1036214:- | gene-YDR303C_CBS436 | rna-NM_001180611.3_CBS436 | cds-NP_010589.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1011869-1014526:- | gene-YDR303C_CBS6412 | rna-NM_001180611.3_CBS6412 | cds-NP_010589.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1033107-1035764:- | gene-YDR303C_CBS6413 | rna-NM_001180611.3_CBS6413 | cds-NP_010589.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1067371-1070028:- | gene-YDR303C_CENPK1137D | rna-NM_001180611.3_CENPK1137D | cds-NP_010589.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1019097-1021754:- | gene-YDR303C_EthanolRed | rna-NM_001180611.3_EthanolRed | cds-NP_010589.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1027499-1030156:- | gene-YDR303C_FaliES1 | rna-NM_001180611.3_FaliES1 | cds-NP_010589.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000130.1:45291-47948:- | gene-YDR303C_JAY291 | rna-NM_001180611.3_JAY291 | cds-NP_010589.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1033494-1036151:- | gene-YDR303C_MUCL30387 | rna-NM_001180611.3_MUCL30387 | cds-NP_010589.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1020591-1023248:- | gene-YDR303C_MUCL30388 | rna-NM_001180611.3_MUCL30388 | cds-NP_010589.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1006993-1009650:- | gene-YDR303C_MUCL39482 | rna-NM_001180611.3_MUCL39482 | cds-NP_010589.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:946959-949616:- | gene-YDR303C_MUCL42920 | rna-NM_001180611.3_MUCL42920 | cds-NP_010589.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1068652-1071309:- | gene-YDR303C_NCIM3186 | rna-NM_001180611.3_NCIM3186 | cds-NP_010589.3_NCIM3186 | 95.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1020286-1022943:- | gene-YDR303C_NCYC1407 | rna-NM_001180611.3_NCYC1407 | cds-NP_010589.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1031264-1033921:- | gene-YDR303C_PE2H3 | rna-NM_001180611.3_PE2H3 | cds-NP_010589.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1036849-1039506:- | gene-YDR303C_PE2H4 | rna-NM_001180611.3_PE2H4 | cds-NP_010589.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1068729-1071386:- | gene-YDR303C_S288C | rna-NM_001180611.3_S288C | cds-NP_010589.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:45464-48121:- | gene-YDR303C_SA1 | rna-NM_001180611.3_SA1 | cds-NP_010589.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1031772-1034429:- | gene-YDR303C_ThermosaccDry | rna-NM_001180611.3_ThermosaccDry | cds-NP_010589.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1047683-1050340:- | gene-YDR303C_VR1 | rna-NM_001180611.3_VR1 | cds-NP_010589.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:75887-78544:- | gene-YDR303C_ZTW1 | rna-NM_001180611.3_ZTW1 | cds-NP_010589.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1027317-1029980:- | gene-YDR303C_Sparadoxus | rna-NM_001180611.3_Sparadoxus | cds-NP_010589.3_Sparadoxus | 88.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |