Gene name: RSC2
Reference locus (S288C): YLR357W
Gene biotype: protein_coding
Description: Chromatin structure-remodeling complex subunit RSC2; Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; involved in telomere maintenance; RSC2 has a paralog, RSC1, that arose from the whole genome duplication; Belongs to the RSC1 family
Top 10 interactors (score): STH1 (0.999); SFH1 (0.999); RSC6 (0.999); RSC9 (0.999); RSC8 (0.999); RSC3 (0.999); ARP7 (0.999); RSC58 (0.999); ARP9 (0.999); RSC4 (0.999); NPL6 (0.999); RTT102 (0.998); RSC30 (0.998); HTL1 (0.997); LDB7 (0.996); RSC1 (0.98); SNF5 (0.974); HHT2 (0.963); SWI3 (0.952); SNF12 (0.943)
Homologues (species, bitscore): PBRM1 (Homo sapiens, 81.6); Pbrm1 (Mus musculus, 124.8); pbrm1l (Danio rerio, 120.6); pbrm1 (Xenopus tropicalis, 120.6); polybromo (Drosophila melanogaster, 89.7); pbrm-1 (Caenorhabditis elegans, 78.6); AT1G76380 (Arabidopsis thaliana, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:790876-793545:+ | gene-YLR357W_AKU4011 | rna-NM_001182246.1_AKU4011 | cds-NP_013461.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:23002-25671:+ | gene-YLR357W_BG1 | rna-NM_001182246.1_BG1 | cds-NP_013461.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:829174-831843:+ | gene-YLR357W_Bruggeman | rna-NM_001182246.1_Bruggeman | cds-NP_013461.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:824678-827347:+ | gene-YLR357W_CAT1 | rna-NM_001182246.1_CAT1 | cds-NP_013461.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:825868-828537:+ | gene-YLR357W_CBS1585 | rna-NM_001182246.1_CBS1585 | cds-NP_013461.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:810083-812752:+ | gene-YLR357W_CBS436 | rna-NM_001182246.1_CBS436 | cds-NP_013461.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:862875-865544:+ | gene-YLR357W_CBS6412 | rna-NM_001182246.1_CBS6412 | cds-NP_013461.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:826759-829428:+ | gene-YLR357W_CBS6413 | rna-NM_001182246.1_CBS6413 | cds-NP_013461.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:826032-828701:+ | gene-YLR357W_CENPK1137D | rna-NM_001182246.1_CENPK1137D | cds-NP_013461.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:783438-786107:+ | gene-YLR357W_EthanolRed | rna-NM_001182246.1_EthanolRed | cds-NP_013461.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:812243-814912:+ | gene-YLR357W_FaliES1 | rna-NM_001182246.1_FaliES1 | cds-NP_013461.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000161.1:22819-25488:+ | gene-YLR357W_JAY291 | rna-NM_001182246.1_JAY291 | cds-NP_013461.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:826589-829258:+ | gene-YLR357W_MUCL30387 | rna-NM_001182246.1_MUCL30387 | cds-NP_013461.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:832207-834876:+ | gene-YLR357W_MUCL30388 | rna-NM_001182246.1_MUCL30388 | cds-NP_013461.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:827087-829756:+ | gene-YLR357W_MUCL39482 | rna-NM_001182246.1_MUCL39482 | cds-NP_013461.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:822365-825034:+ | gene-YLR357W_MUCL42920 | rna-NM_001182246.1_MUCL42920 | cds-NP_013461.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:841305-843974:+ | gene-YLR357W_NCIM3186 | rna-NM_001182246.1_NCIM3186 | cds-NP_013461.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:836307-838976:+ | gene-YLR357W_NCYC1407 | rna-NM_001182246.1_NCYC1407 | cds-NP_013461.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:823240-825909:+ | gene-YLR357W_PE2H3 | rna-NM_001182246.1_PE2H3 | cds-NP_013461.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:822984-825653:+ | gene-YLR357W_PE2H4 | rna-NM_001182246.1_PE2H4 | cds-NP_013461.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:841331-844000:+ | gene-YLR357W_S288C | rna-NM_001182246.1_S288C | cds-NP_013461.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:204707-207376:- | gene-YLR357W_SA1 | rna-NM_001182246.1_SA1 | cds-NP_013461.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:815081-817750:+ | gene-YLR357W_ThermosaccDry | rna-NM_001182246.1_ThermosaccDry | cds-NP_013461.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:828347-831016:+ | gene-YLR357W_VR1 | rna-NM_001182246.1_VR1 | cds-NP_013461.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:152523-155192:+ | gene-YLR357W_ZTW1 | rna-NM_001182246.1_ZTW1 | cds-NP_013461.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:801141-803813:+ | gene-YLR357W_Sparadoxus | rna-NM_001182246.1_Sparadoxus | cds-NP_013461.1_Sparadoxus | 92.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |