Gene name: RSB1
Reference locus (S288C): YOR049C
Gene biotype: protein_coding
Description: Putative sphingoid long-chain base (LCB) efflux transporter; integral membrane transporter that localizes to the plasma membrane and may transport long chain bases (LCBs) from the cytoplasmic side toward the extracytoplasmic side of the membrane; role in glycerophospholipid translocation; suppressor of the sphingoid LCB sensitivity of an LCB-lyase mutation
Top 10 interactors (score): YOR1 (0.826); PDR5 (0.794); CIS1 (0.734); PDR3 (0.714); PDR1 (0.705); PLB3 (0.689); ATF2 (0.679); PDH1 (0.671); ERG29 (0.653); WWM1 (0.652); YPD1 (0.643); DPL1 (0.633); HAL9 (0.623); ERP4 (0.601); DNF1 (0.593); DNF2 (0.593); MMT1 (0.587); MMT2 (0.587); YBT1 (0.577); YLL056C (0.573)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:407012-408076:- | gene-YOR049C_AKU4011 | rna-NM_001183468.1_AKU4011 | cds-NP_014692.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:222610-223674:- | gene-YOR049C_BG1 | rna-NM_001183468.1_BG1 | cds-NP_014692.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:409737-410801:- | gene-YOR049C_Bruggeman | rna-NM_001183468.1_Bruggeman | cds-NP_014692.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:407929-408993:- | gene-YOR049C_CAT1 | rna-NM_001183468.1_CAT1 | cds-NP_014692.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:401703-402767:- | gene-YOR049C_CBS1585 | rna-NM_001183468.1_CBS1585 | cds-NP_014692.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:406060-407124:- | gene-YOR049C_CBS436 | rna-NM_001183468.1_CBS436 | cds-NP_014692.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:401056-402120:- | gene-YOR049C_CBS6412 | rna-NM_001183468.1_CBS6412 | cds-NP_014692.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:408433-409497:- | gene-YOR049C_CBS6413 | rna-NM_001183468.1_CBS6413 | cds-NP_014692.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:422666-423730:- | gene-YOR049C_CENPK1137D | rna-NM_001183468.1_CENPK1137D | cds-NP_014692.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:403710-404774:- | gene-YOR049C_EthanolRed | rna-NM_001183468.1_EthanolRed | cds-NP_014692.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:407057-408121:- | gene-YOR049C_FaliES1 | rna-NM_001183468.1_FaliES1 | cds-NP_014692.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:77720-78784:- | gene-YOR049C_JAY291 | rna-NM_001183468.1_JAY291 | cds-NP_014692.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:414533-415597:- | gene-YOR049C_MUCL30387 | rna-NM_001183468.1_MUCL30387 | cds-NP_014692.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:417829-418895:- | gene-YOR049C_MUCL30388 | rna-NM_001183468.1_MUCL30388 | cds-NP_014692.1_MUCL30388 | 99.1 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:409186-410250:- | gene-YOR049C_MUCL39482 | rna-NM_001183468.1_MUCL39482 | cds-NP_014692.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:424013-425077:- | gene-YOR049C_MUCL42920 | rna-NM_001183468.1_MUCL42920 | cds-NP_014692.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:422557-423621:- | gene-YOR049C_NCIM3186 | rna-NM_001183468.1_NCIM3186 | cds-NP_014692.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:415888-416952:- | gene-YOR049C_NCYC1407 | rna-NM_001183468.1_NCYC1407 | cds-NP_014692.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:414746-415810:- | gene-YOR049C_PE2H3 | rna-NM_001183468.1_PE2H3 | cds-NP_014692.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:425127-426191:- | gene-YOR049C_PE2H4 | rna-NM_001183468.1_PE2H4 | cds-NP_014692.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:422668-423732:- | gene-YOR049C_S288C | rna-NM_001183468.1_S288C | cds-NP_014692.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:390612-391676:- | gene-YOR049C_SA1 | rna-NM_001183468.1_SA1 | cds-NP_014692.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:405596-406660:- | gene-YOR049C_ThermosaccDry | rna-NM_001183468.1_ThermosaccDry | cds-NP_014692.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:407071-408135:- | gene-YOR049C_VR1 | rna-NM_001183468.1_VR1 | cds-NP_014692.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:140240-141304:- | gene-YOR049C_ZTW1 | rna-NM_001183468.1_ZTW1 | cds-NP_014692.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:413137-414201:- | gene-YOR049C_Sparadoxus | rna-NM_001183468.1_Sparadoxus | cds-NP_014692.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |