Gene name: RRT8
Reference locus (S288C): YOL048C
Gene biotype: protein_coding
Description: Protein involved in spore wall assembly; shares similarity with Lds1p and Lds2p and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants; identified in a screen for mutants with increased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to lipid particles; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): IRC18 (0.849); OSW2 (0.774); YKL033W-A (0.76); SKG1 (0.76); OSW7 (0.749); SHE10 (0.749); LOH1 (0.749); ECM9 (0.748); NPP1 (0.746); DTR1 (0.744); BSC2 (0.715); YPR089W (0.712); OSW5 (0.711); PIR5 (0.711); TPH3 (0.698); RRT12 (0.695); SAE3 (0.691); PRM10 (0.671); EMC3 (0.659); DIT2 (0.657)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:224528-225634:- | gene-YOL048C_AKU4011 | rna-NM_001183302.1_AKU4011 | cds-NP_014594.2_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:40188-41294:- | gene-YOL048C_BG1 | rna-NM_001183302.1_BG1 | cds-NP_014594.2_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:227421-228527:- | gene-YOL048C_Bruggeman | rna-NM_001183302.1_Bruggeman | cds-NP_014594.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:225276-226382:- | gene-YOL048C_CAT1 | rna-NM_001183302.1_CAT1 | cds-NP_014594.2_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:219196-220302:- | gene-YOL048C_CBS1585 | rna-NM_001183302.1_CBS1585 | cds-NP_014594.2_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:223515-224621:- | gene-YOL048C_CBS436 | rna-NM_001183302.1_CBS436 | cds-NP_014594.2_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:218593-219699:- | gene-YOL048C_CBS6412 | rna-NM_001183302.1_CBS6412 | cds-NP_014594.2_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:226112-227218:- | gene-YOL048C_CBS6413 | rna-NM_001183302.1_CBS6413 | cds-NP_014594.2_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:239905-241011:- | gene-YOL048C_CENPK1137D | rna-NM_001183302.1_CENPK1137D | cds-NP_014594.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:221548-222654:- | gene-YOL048C_EthanolRed | rna-NM_001183302.1_EthanolRed | cds-NP_014594.2_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:224464-225570:- | gene-YOL048C_FaliES1 | rna-NM_001183302.1_FaliES1 | cds-NP_014594.2_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:40883-41989:+ | gene-YOL048C_JAY291 | rna-NM_001183302.1_JAY291 | cds-NP_014594.2_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:230444-231550:- | gene-YOL048C_MUCL30387 | rna-NM_001183302.1_MUCL30387 | cds-NP_014594.2_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:234791-235897:- | gene-YOL048C_MUCL30388 | rna-NM_001183302.1_MUCL30388 | cds-NP_014594.2_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:226714-227820:- | gene-YOL048C_MUCL39482 | rna-NM_001183302.1_MUCL39482 | cds-NP_014594.2_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:241655-242761:- | gene-YOL048C_MUCL42920 | rna-NM_001183302.1_MUCL42920 | cds-NP_014594.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:240093-241199:- | gene-YOL048C_NCIM3186 | rna-NM_001183302.1_NCIM3186 | cds-NP_014594.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:233458-234564:- | gene-YOL048C_NCYC1407 | rna-NM_001183302.1_NCYC1407 | cds-NP_014594.2_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:215882-216988:- | gene-YOL048C_PE2H3 | rna-NM_001183302.1_PE2H3 | cds-NP_014594.2_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:226856-227962:- | gene-YOL048C_PE2H4 | rna-NM_001183302.1_PE2H4 | cds-NP_014594.2_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:240204-241310:- | gene-YOL048C_S288C | rna-NM_001183302.1_S288C | cds-NP_014594.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:208205-209311:- | gene-YOL048C_SA1 | rna-NM_001183302.1_SA1 | cds-NP_014594.2_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:223035-224141:- | gene-YOL048C_ThermosaccDry | rna-NM_001183302.1_ThermosaccDry | cds-NP_014594.2_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:223107-224213:- | gene-YOL048C_VR1 | rna-NM_001183302.1_VR1 | cds-NP_014594.2_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:222908-224014:- | gene-YOL048C_ZTW1 | rna-NM_001183302.1_ZTW1 | cds-NP_014594.2_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:231294-232404:- | gene-YOL048C_Sparadoxus | rna-NM_001183302.1_Sparadoxus | cds-NP_014594.2_Sparadoxus | 89.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |