Gene name: RRT7
Reference locus (S288C): YLL030C
Gene biotype: protein_coding
Description: Regulator of rDNA transcription protein 7; Putative protein of unknown function; conserved across S. cerevisiae strains; identified in a screen for mutants with increased levels of rDNA transcription
Top 10 interactors (score): CSC1 (0.891); IRC19 (0.76); YLL032C (0.748); YDR433W (0.748); PNG1 (0.714); GPI13 (0.712); FRA1 (0.71); DTR1 (0.694); AAD10 (0.62); PPG1 (0.573); SPC98 (0.569); DDI1 (0.563); MSS11 (0.554); TPO1 (0.526); RFX1 (0.525); UFD2 (0.522); DSK2 (0.497); RPN13 (0.48); ICP55 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:67515-67856:- | gene-YLL030C_AKU4011 | rna-NM_001348853.1_AKU4011 | cds-NP_001335793.1_AKU4011 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:31464-31804:- | gene-YLL030C_BG1 | rna-NM_001348853.1_BG1 | cds-NP_001335793.1_BG1 | 99.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:77770-78111:- | gene-YLL030C_Bruggeman | rna-NM_001348853.1_Bruggeman | cds-NP_001335793.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:78391-78732:- | gene-YLL030C_CAT1 | rna-NM_001348853.1_CAT1 | cds-NP_001335793.1_CAT1 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:75215-75556:- | gene-YLL030C_CBS1585 | rna-NM_001348853.1_CBS1585 | cds-NP_001335793.1_CBS1585 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:65413-65754:- | gene-YLL030C_CBS436 | rna-NM_001348853.1_CBS436 | cds-NP_001335793.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:75087-75428:- | gene-YLL030C_CBS6412 | rna-NM_001348853.1_CBS6412 | cds-NP_001335793.1_CBS6412 | 97.0 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:75213-75554:- | gene-YLL030C_CBS6413 | rna-NM_001348853.1_CBS6413 | cds-NP_001335793.1_CBS6413 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:65363-65704:- | gene-YLL030C_CENPK1137D | rna-NM_001348853.1_CENPK1137D | cds-NP_001335793.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:67913-68255:- | gene-YLL030C_EthanolRed | rna-NM_001348853.1_EthanolRed | cds-NP_001335793.1_EthanolRed | 97.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:67226-67568:- | gene-YLL030C_FaliES1 | rna-NM_001348853.1_FaliES1 | cds-NP_001335793.1_FaliES1 | 97.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000118.1:11435-11776:+ | gene-YLL030C_JAY291 | rna-NM_001348853.1_JAY291 | cds-NP_001335793.1_JAY291 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:75181-75522:- | gene-YLL030C_MUCL30387 | rna-NM_001348853.1_MUCL30387 | cds-NP_001335793.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:79908-80250:- | gene-YLL030C_MUCL30388 | rna-NM_001348853.1_MUCL30388 | cds-NP_001335793.1_MUCL30388 | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:75424-75765:- | gene-YLL030C_MUCL39482 | rna-NM_001348853.1_MUCL39482 | cds-NP_001335793.1_MUCL39482 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:75272-75613:- | gene-YLL030C_MUCL42920 | rna-NM_001348853.1_MUCL42920 | cds-NP_001335793.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:80330-80671:- | gene-YLL030C_NCIM3186 | rna-NM_001348853.1_NCIM3186 | cds-NP_001335793.1_NCIM3186 | 78.6 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:67290-67631:- | gene-YLL030C_NCYC1407 | rna-NM_001348853.1_NCYC1407 | cds-NP_001335793.1_NCYC1407 | 97.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:73978-74319:- | gene-YLL030C_PE2H3 | rna-NM_001348853.1_PE2H3 | cds-NP_001335793.1_PE2H3 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:73784-74125:- | gene-YLL030C_PE2H4 | rna-NM_001348853.1_PE2H4 | cds-NP_001335793.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:80356-80697:- | gene-YLL030C_S288C | rna-NM_001348853.1_S288C | cds-NP_001335793.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:73886-74227:- | gene-YLL030C_SA1 | rna-NM_001348853.1_SA1 | cds-NP_001335793.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:67732-68074:- | gene-YLL030C_ThermosaccDry | rna-NM_001348853.1_ThermosaccDry | cds-NP_001335793.1_ThermosaccDry | 97.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:81550-81891:- | gene-YLL030C_VR1 | rna-NM_001348853.1_VR1 | cds-NP_001335793.1_VR1 | 98.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:67282-67624:- | gene-YLL030C_ZTW1 | rna-NM_001348853.1_ZTW1 | cds-NP_001335793.1_ZTW1 | 97.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |