RRG8 (YPR116W)


Gene profile

Gene name: RRG8
Reference locus (S288C): YPR116W
Gene biotype: protein_coding

Description: Protein of unknown function; required for mitochondrial genome maintenance; null mutation results in a decrease in plasma membrane electron transport; Belongs to the RRG8 family

Top 10 interactors (score): GEP5 (0.948); RRG1 (0.905); RRG7 (0.891); IRC19 (0.868); YDR114C (0.847); RRG9 (0.841); GTF1 (0.84); YNL184C (0.813); AIM22 (0.76); CCM1 (0.747); COA3 (0.747); HER2 (0.717); MHR1 (0.678); MGM101 (0.657); PET130 (0.644); MSH1 (0.619); RPM2 (0.602); SRF1 (0.569); YDL129W (0.485); GDS1 (0.463)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:730472-731305:+ gene-YPR116W_AKU4011 rna-NM_001184213.1_AKU4011 cds-NP_015441.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:166507-167340:- gene-YPR116W_BG1 rna-NM_001184213.1_BG1 cds-NP_015441.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:809993-810826:+ gene-YPR116W_Bruggeman rna-NM_001184213.1_Bruggeman cds-NP_015441.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:852783-853616:+ gene-YPR116W_CAT1 rna-NM_001184213.1_CAT1 cds-NP_015441.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:734729-735562:+ gene-YPR116W_CBS1585 rna-NM_001184213.1_CBS1585 cds-NP_015441.1_CBS1585 99.2 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:749033-749866:+ gene-YPR116W_CBS436 rna-NM_001184213.1_CBS436 cds-NP_015441.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:737452-738285:+ gene-YPR116W_CBS6412 rna-NM_001184213.1_CBS6412 cds-NP_015441.1_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:732175-733008:+ gene-YPR116W_CBS6413 rna-NM_001184213.1_CBS6413 cds-NP_015441.1_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:758634-759467:+ gene-YPR116W_CENPK1137D rna-NM_001184213.1_CENPK1137D cds-NP_015441.1_CENPK1137D 99.8 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:1057084-1057917:+ gene-YPR116W_EthanolRed rna-NM_001184213.1_EthanolRed cds-NP_015441.1_EthanolRed 99.2 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:736631-737464:+ gene-YPR116W_FaliES1 rna-NM_001184213.1_FaliES1 cds-NP_015441.1_FaliES1 99.2 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000436.1:27406-28239:+ gene-YPR116W_JAY291 rna-NM_001184213.1_JAY291 cds-NP_015441.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:749738-750571:+ gene-YPR116W_MUCL30387 rna-NM_001184213.1_MUCL30387 cds-NP_015441.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:748889-749722:+ gene-YPR116W_MUCL30388 rna-NM_001184213.1_MUCL30388 cds-NP_015441.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:727236-728069:+ gene-YPR116W_MUCL39482 rna-NM_001184213.1_MUCL39482 cds-NP_015441.1_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:790776-791609:+ gene-YPR116W_MUCL42920 rna-NM_001184213.1_MUCL42920 cds-NP_015441.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:758631-759464:+ gene-YPR116W_NCIM3186 rna-NM_001184213.1_NCIM3186 cds-NP_015441.1_NCIM3186 99.0 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:735829-736662:+ gene-YPR116W_NCYC1407 rna-NM_001184213.1_NCYC1407 cds-NP_015441.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:742104-742937:+ gene-YPR116W_PE2H3 rna-NM_001184213.1_PE2H3 cds-NP_015441.1_PE2H3 99.6 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:741752-742585:+ gene-YPR116W_PE2H4 rna-NM_001184213.1_PE2H4 cds-NP_015441.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:758648-759481:+ gene-YPR116W_S288C rna-NM_001184213.1_S288C cds-NP_015441.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000028.1:56785-57618:+ gene-YPR116W_SA1 rna-NM_001184213.1_SA1 cds-NP_015441.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:736076-736909:+ gene-YPR116W_ThermosaccDry rna-NM_001184213.1_ThermosaccDry cds-NP_015441.1_ThermosaccDry 99.2 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:752735-753568:+ gene-YPR116W_VR1 rna-NM_001184213.1_VR1 cds-NP_015441.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:735127-735960:+ gene-YPR116W_ZTW1 rna-NM_001184213.1_ZTW1 cds-NP_015441.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:736083-736916:+ gene-YPR116W_Sparadoxus rna-NM_001184213.1_Sparadoxus cds-NP_015441.1_Sparadoxus 84.3 99.7 Verified 1 1 1 False True False False False

Additional files