Gene name: RRD2
Reference locus (S288C): YPL152W
Gene biotype: protein_coding
Description: Serine/threonine-protein phosphatase 2A activator 2; Peptidyl-prolyl cis/trans-isomerase; also activates the phosphotyrosyl phosphatase activity of protein phosphatase 2A (PP2A); regulates G1 phase progression, the osmoresponse, microtubule dynamics; subunit of the Tap42p-Pph21p-Rrd2p complex; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): PPH21 (0.999); TPD3 (0.999); SIT4 (0.997); PPH22 (0.993); PPH3 (0.99); CDC55 (0.99); TAP42 (0.986); PPE1 (0.975); PPM1 (0.967); GLC7 (0.964); RTS1 (0.949); PSY2 (0.947); CMP2 (0.944); CNA1 (0.942); PSY4 (0.936); RRD1 (0.929); SDS22 (0.926); CNB1 (0.917); GAC1 (0.915); TIP41 (0.912)
Homologues (species, bitscore): PPP2R4 (Homo sapiens, 212.2); Ppp2r4 (Mus musculus, 214.2); ppp2r4 (Danio rerio, 213.0); ptpa (Xenopus tropicalis, 125.9); Ptpa (Drosophila melanogaster, 172.9); Y71H2AM.20 (Caenorhabditis elegans, 203.4); AT4G08960 (Arabidopsis thaliana, 253.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:242683-243759:+ | gene-YPL152W_AKU4011 | rna-NM_001183966.1_AKU4011 | cds-NP_015173.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:448371-449447:+ | gene-YPL152W_BG1 | rna-NM_001183966.1_BG1 | cds-NP_015173.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:268676-269752:+ | gene-YPL152W_Bruggeman | rna-NM_001183966.1_Bruggeman | cds-NP_015173.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:265360-266436:+ | gene-YPL152W_CAT1 | rna-NM_001183966.1_CAT1 | cds-NP_015173.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:246746-247822:+ | gene-YPL152W_CBS1585 | rna-NM_001183966.1_CBS1585 | cds-NP_015173.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:261423-262499:+ | gene-YPL152W_CBS436 | rna-NM_001183966.1_CBS436 | cds-NP_015173.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:251424-252500:+ | gene-YPL152W_CBS6412 | rna-NM_001183966.1_CBS6412 | cds-NP_015173.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:243386-244462:+ | gene-YPL152W_CBS6413 | rna-NM_001183966.1_CBS6413 | cds-NP_015173.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:264930-266006:+ | gene-YPL152W_CENPK1137D | rna-NM_001183966.1_CENPK1137D | cds-NP_015173.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:241373-242449:+ | gene-YPL152W_EthanolRed | rna-NM_001183966.1_EthanolRed | cds-NP_015173.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:248965-250041:+ | gene-YPL152W_FaliES1 | rna-NM_001183966.1_FaliES1 | cds-NP_015173.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:115809-116885:- | gene-YPL152W_JAY291 | rna-NM_001183966.1_JAY291 | cds-NP_015173.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:259919-260995:+ | gene-YPL152W_MUCL30387 | rna-NM_001183966.1_MUCL30387 | cds-NP_015173.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:257936-259012:+ | gene-YPL152W_MUCL30388 | rna-NM_001183966.1_MUCL30388 | cds-NP_015173.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:240075-241151:+ | gene-YPL152W_MUCL39482 | rna-NM_001183966.1_MUCL39482 | cds-NP_015173.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:297316-298392:+ | gene-YPL152W_MUCL42920 | rna-NM_001183966.1_MUCL42920 | cds-NP_015173.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:265011-266087:+ | gene-YPL152W_NCIM3186 | rna-NM_001183966.1_NCIM3186 | cds-NP_015173.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:246538-247614:+ | gene-YPL152W_NCYC1407 | rna-NM_001183966.1_NCYC1407 | cds-NP_015173.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:253984-255060:+ | gene-YPL152W_PE2H3 | rna-NM_001183966.1_PE2H3 | cds-NP_015173.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:253616-254692:+ | gene-YPL152W_PE2H4 | rna-NM_001183966.1_PE2H4 | cds-NP_015173.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:265028-266104:+ | gene-YPL152W_S288C | rna-NM_001183966.1_S288C | cds-NP_015173.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:107583-108659:- | gene-YPL152W_SA1 | rna-NM_001183966.1_SA1 | cds-NP_015173.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:248763-249839:+ | gene-YPL152W_ThermosaccDry | rna-NM_001183966.1_ThermosaccDry | cds-NP_015173.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:263744-264820:+ | gene-YPL152W_VR1 | rna-NM_001183966.1_VR1 | cds-NP_015173.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:248091-249167:+ | gene-YPL152W_ZTW1 | rna-NM_001183966.1_ZTW1 | cds-NP_015173.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:249732-250808:+ | gene-YPL152W_Sparadoxus | rna-NM_001183966.1_Sparadoxus | cds-NP_015173.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |