Gene name: RPS9B
Reference locus (S288C): YBR189W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication
Top 10 interactors (score): RPL19A (0.999); RPS12 (0.999); RPS11A (0.999); ENP1 (0.999); RPS10A (0.999); RPS4B (0.999); RPL30 (0.999); RPL9B (0.999); RPS2 (0.999); RPS3 (0.999); RPL20A (0.999); RPP2B (0.999); RPS23A (0.999); RPS10B (0.999); RPL21B (0.999); RPS4A (0.999); RPS8A (0.999); RPS16B (0.999); RPL35A (0.999); RPL40B (0.999)
Homologues (species, bitscore): RPS9 (Homo sapiens, 278.5); Rps9 (Mus musculus, 278.5); rps9 (Danio rerio, 280.8); rps9 (Xenopus tropicalis, 280.8); RpS9 (Drosophila melanogaster, 284.6); rps-9 (Caenorhabditis elegans, 259.2); AT5G15200 (Arabidopsis thaliana, 270.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:587877-588877:+ | gene-YBR189W_AKU4011 | rna-NM_001178537.3_AKU4011 | cds-NP_009748.3_AKU4011 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:577884-578884:+ | gene-YBR189W_BG1 | rna-NM_001178537.3_BG1 | cds-NP_009748.3_BG1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:393737-394737:+ | gene-YBR189W_Bruggeman | rna-NM_001178537.3_Bruggeman | cds-NP_009748.3_Bruggeman | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:593145-594145:+ | gene-YBR189W_CAT1 | rna-NM_001178537.3_CAT1 | cds-NP_009748.3_CAT1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:579658-580658:+ | gene-YBR189W_CBS1585 | rna-NM_001178537.3_CBS1585 | cds-NP_009748.3_CBS1585 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:587210-588210:+ | gene-YBR189W_CBS436 | rna-NM_001178537.3_CBS436 | cds-NP_009748.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:676267-677267:+ | gene-YBR189W_CBS6412 | rna-NM_001178537.3_CBS6412 | cds-NP_009748.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:585464-586464:+ | gene-YBR189W_CBS6413 | rna-NM_001178537.3_CBS6413 | cds-NP_009748.3_CBS6413 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:598282-599282:+ | gene-YBR189W_CENPK1137D | rna-NM_001178537.3_CENPK1137D | cds-NP_009748.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:713034-714034:+ | gene-YBR189W_EthanolRed | rna-NM_001178537.3_EthanolRed | cds-NP_009748.3_EthanolRed | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:603945-604945:+ | gene-YBR189W_FaliES1 | rna-NM_001178537.3_FaliES1 | cds-NP_009748.3_FaliES1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000104.1:1274-2274:- | gene-YBR189W_JAY291 | rna-NM_001178537.3_JAY291 | cds-NP_009748.3_JAY291 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:592418-593418:+ | gene-YBR189W_MUCL30387 | rna-NM_001178537.3_MUCL30387 | cds-NP_009748.3_MUCL30387 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:609493-610493:+ | gene-YBR189W_MUCL30388 | rna-NM_001178537.3_MUCL30388 | cds-NP_009748.3_MUCL30388 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:578031-579031:+ | gene-YBR189W_MUCL39482 | rna-NM_001178537.3_MUCL39482 | cds-NP_009748.3_MUCL39482 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:587453-588453:+ | gene-YBR189W_MUCL42920 | rna-NM_001178537.3_MUCL42920 | cds-NP_009748.3_MUCL42920 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:604305-605305:+ | gene-YBR189W_NCIM3186 | rna-NM_001178537.3_NCIM3186 | cds-NP_009748.3_NCIM3186 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:580139-581139:+ | gene-YBR189W_NCYC1407 | rna-NM_001178537.3_NCYC1407 | cds-NP_009748.3_NCYC1407 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:592756-593756:+ | gene-YBR189W_PE2H3 | rna-NM_001178537.3_PE2H3 | cds-NP_009748.3_PE2H3 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:590432-591432:+ | gene-YBR189W_PE2H4 | rna-NM_001178537.3_PE2H4 | cds-NP_009748.3_PE2H4 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:604508-605508:+ | gene-YBR189W_S288C | rna-NM_001178537.3_S288C | cds-NP_009748.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000080.1:12206-13206:+ | gene-YBR189W_SA1 | rna-NM_001178537.3_SA1 | cds-NP_009748.3_SA1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:602955-603955:+ | gene-YBR189W_ThermosaccDry | rna-NM_001178537.3_ThermosaccDry | cds-NP_009748.3_ThermosaccDry | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:584131-585131:+ | gene-YBR189W_VR1 | rna-NM_001178537.3_VR1 | cds-NP_009748.3_VR1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:577572-578571:+ | gene-YBR189W_ZTW1 | rna-NM_001178537.3_ZTW1 | cds-NP_009748.3_ZTW1 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:619450-620456:+ | gene-YBR189W_Sparadoxus | rna-NM_001178537.3_Sparadoxus | cds-NP_009748.3_Sparadoxus | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |