Gene name: RPS9A
Reference locus (S288C): YPL081W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication
Top 10 interactors (score): RPS28A (0.999); RPS24B (0.999); RPS24A (0.999); RPL7B (0.999); RPS0B (0.999); RPS6B (0.999); RPL36A (0.999); RPS18B (0.999); RPL23B (0.999); RPL26A (0.999); RPS9B (0.999); RPL28 (0.999); RPS16A (0.999); RPL31A (0.999); RPS19B (0.999); RPS11B (0.999); RPP1A (0.999); RPS15 (0.999); RPS14A (0.999); RPL6B (0.999)
Homologues (species, bitscore): RPS9 (Homo sapiens, 276.2); Rps9 (Mus musculus, 276.2); rps9 (Danio rerio, 280.8); rps9 (Xenopus tropicalis, 278.9); RpS9 (Drosophila melanogaster, 279.3); rps-9 (Caenorhabditis elegans, 256.9); AT5G15200 (Arabidopsis thaliana, 268.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:382676-383767:+ | gene-YPL081W_AKU4011 | rna-NM_001183895.1_AKU4011 | cds-NP_015244.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:588352-589446:+ | gene-YPL081W_BG1 | rna-NM_001183895.1_BG1 | cds-NP_015244.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:458999-460090:+ | gene-YPL081W_Bruggeman | rna-NM_001183895.1_Bruggeman | cds-NP_015244.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:499359-500454:+ | gene-YPL081W_CAT1 | rna-NM_001183895.1_CAT1 | cds-NP_015244.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:386744-387838:+ | gene-YPL081W_CBS1585 | rna-NM_001183895.1_CBS1585 | cds-NP_015244.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:401303-402397:+ | gene-YPL081W_CBS436 | rna-NM_001183895.1_CBS436 | cds-NP_015244.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:390938-392029:+ | gene-YPL081W_CBS6412 | rna-NM_001183895.1_CBS6412 | cds-NP_015244.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:383296-384390:+ | gene-YPL081W_CBS6413 | rna-NM_001183895.1_CBS6413 | cds-NP_015244.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:404919-406013:+ | gene-YPL081W_CENPK1137D | rna-NM_001183895.1_CENPK1137D | cds-NP_015244.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:381044-382135:+ | gene-YPL081W_EthanolRed | rna-NM_001183895.1_EthanolRed | cds-NP_015244.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:388874-389965:+ | gene-YPL081W_FaliES1 | rna-NM_001183895.1_FaliES1 | cds-NP_015244.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000350.1:1264-2358:- | gene-YPL081W_JAY291 | rna-NM_001183895.1_JAY291 | cds-NP_015244.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:399830-400921:+ | gene-YPL081W_MUCL30387 | rna-NM_001183895.1_MUCL30387 | cds-NP_015244.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:398631-399722:+ | gene-YPL081W_MUCL30388 | rna-NM_001183895.1_MUCL30388 | cds-NP_015244.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:380073-381167:+ | gene-YPL081W_MUCL39482 | rna-NM_001183895.1_MUCL39482 | cds-NP_015244.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:437937-439028:+ | gene-YPL081W_MUCL42920 | rna-NM_001183895.1_MUCL42920 | cds-NP_015244.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:404933-406027:+ | gene-YPL081W_NCIM3186 | rna-NM_001183895.1_NCIM3186 | cds-NP_015244.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:386685-387776:+ | gene-YPL081W_NCYC1407 | rna-NM_001183895.1_NCYC1407 | cds-NP_015244.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:393963-395057:+ | gene-YPL081W_PE2H3 | rna-NM_001183895.1_PE2H3 | cds-NP_015244.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:393586-394680:+ | gene-YPL081W_PE2H4 | rna-NM_001183895.1_PE2H4 | cds-NP_015244.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:404950-406044:+ | gene-YPL081W_S288C | rna-NM_001183895.1_S288C | cds-NP_015244.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:27061-28155:+ | gene-YPL081W_SA1 | rna-NM_001183895.1_SA1 | cds-NP_015244.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:388674-389765:+ | gene-YPL081W_ThermosaccDry | rna-NM_001183895.1_ThermosaccDry | cds-NP_015244.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:403672-404766:+ | gene-YPL081W_VR1 | rna-NM_001183895.1_VR1 | cds-NP_015244.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:387983-389074:+ | gene-YPL081W_ZTW1 | rna-NM_001183895.1_ZTW1 | cds-NP_015244.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:389654-390738:+ | gene-YPL081W_Sparadoxus | rna-NM_001183895.1_Sparadoxus | cds-NP_015244.1_Sparadoxus | 91.6 | 98.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |