Gene name: RPS7A
Reference locus (S288C): YOR096W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; interacts with Kti11p; deletion causes hypersensitivity to zymocin; homologous to mammalian ribosomal protein S7, no bacterial homolog; RPS7A has a paralog, RPS7B, that arose from the whole genome duplication
Top 10 interactors (score): RPS17B (0.999); RPS21B (0.999); RPL40A (0.999); RPL17B (0.999); RPL20B (0.999); RPS30A (0.999); RPL29 (0.999); RPL23A (0.999); RPS26A (0.999); RPS27A (0.999); RPL17A (0.999); RPL3 (0.999); RPL11B (0.999); RPS29B (0.999); RPS19A (0.999); RPL16B (0.999); RPL24A (0.999); RPP0 (0.999); RPL33A (0.999); RPS8B (0.999)
Homologues (species, bitscore): RPS7 (Homo sapiens, 204.5); Rps7 (Mus musculus, 204.5); rps7 (Danio rerio, 198.7); rps7 (Xenopus tropicalis, 205.7); RpS7 (Drosophila melanogaster, 151.4); rps-7 (Caenorhabditis elegans, 167.9); AT1G48830 (Arabidopsis thaliana, 179.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:489869-490840:+ | gene-YOR096W_AKU4011 | rna-NM_001183515.1_AKU4011 | cds-NP_014739.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:88215-89182:- | gene-YOR096W_BG1 | rna-NM_001183515.1_BG1 | cds-NP_014739.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:493458-494425:+ | gene-YOR096W_Bruggeman | rna-NM_001183515.1_Bruggeman | cds-NP_014739.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:493433-494400:+ | gene-YOR096W_CAT1 | rna-NM_001183515.1_CAT1 | cds-NP_014739.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:485161-486132:+ | gene-YOR096W_CBS1585 | rna-NM_001183515.1_CBS1585 | cds-NP_014739.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:490193-491160:+ | gene-YOR096W_CBS436 | rna-NM_001183515.1_CBS436 | cds-NP_014739.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:483902-484873:+ | gene-YOR096W_CBS6412 | rna-NM_001183515.1_CBS6412 | cds-NP_014739.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:491197-492168:+ | gene-YOR096W_CBS6413 | rna-NM_001183515.1_CBS6413 | cds-NP_014739.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:505839-506812:+ | gene-YOR096W_CENPK1137D | rna-NM_001183515.1_CENPK1137D | cds-NP_014739.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:486397-487370:+ | gene-YOR096W_EthanolRed | rna-NM_001183515.1_EthanolRed | cds-NP_014739.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:489906-490879:+ | gene-YOR096W_FaliES1 | rna-NM_001183515.1_FaliES1 | cds-NP_014739.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:68362-69329:- | gene-YOR096W_JAY291 | rna-NM_001183515.1_JAY291 | cds-NP_014739.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:497994-498961:+ | gene-YOR096W_MUCL30387 | rna-NM_001183515.1_MUCL30387 | cds-NP_014739.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:503180-504147:+ | gene-YOR096W_MUCL30388 | rna-NM_001183515.1_MUCL30388 | cds-NP_014739.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:492797-493768:+ | gene-YOR096W_MUCL39482 | rna-NM_001183515.1_MUCL39482 | cds-NP_014739.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:508900-509867:+ | gene-YOR096W_MUCL42920 | rna-NM_001183515.1_MUCL42920 | cds-NP_014739.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:505683-506656:+ | gene-YOR096W_NCIM3186 | rna-NM_001183515.1_NCIM3186 | cds-NP_014739.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:499258-500229:+ | gene-YOR096W_NCYC1407 | rna-NM_001183515.1_NCYC1407 | cds-NP_014739.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:498266-499233:+ | gene-YOR096W_PE2H3 | rna-NM_001183515.1_PE2H3 | cds-NP_014739.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:508642-509609:+ | gene-YOR096W_PE2H4 | rna-NM_001183515.1_PE2H4 | cds-NP_014739.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:505794-506767:+ | gene-YOR096W_S288C | rna-NM_001183515.1_S288C | cds-NP_014739.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000098.1:16045-17012:- | gene-YOR096W_SA1 | rna-NM_001183515.1_SA1 | cds-NP_014739.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:489060-490033:+ | gene-YOR096W_ThermosaccDry | rna-NM_001183515.1_ThermosaccDry | cds-NP_014739.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:491187-492160:+ | gene-YOR096W_VR1 | rna-NM_001183515.1_VR1 | cds-NP_014739.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:223050-224023:+ | gene-YOR096W_ZTW1 | rna-NM_001183515.1_ZTW1 | cds-NP_014739.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:495039-496018:+ | gene-YOR096W_Sparadoxus | rna-NM_001183515.1_Sparadoxus | cds-NP_014739.1_Sparadoxus | 97.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |