Gene name: RPS5
Reference locus (S288C): YJR123W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; least basic of non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; homologous to mammalian ribosomal protein S5 and bacterial S7
Top 10 interactors (score): RPL37B (0.999); RPL12A (0.999); RPL34B (0.999); RPS23A (0.999); RPS4A (0.999); RPL21B (0.999); RPS10B (0.999); RPS11A (0.999); RPS10A (0.999); RPS12 (0.999); RPL19A (0.999); RPS16B (0.999); RPL33B (0.999); RPS8A (0.999); RPL13B (0.999); RPL4B (0.999); ENP1 (0.999); TMA19 (0.999); RPL30 (0.999); RPS4B (0.999)
Homologues (species, bitscore): RPS5 (Homo sapiens, 288.1); Rps5 (Mus musculus, 290.0); rps5 (Danio rerio, 286.6); rps5 (Xenopus tropicalis, 286.2); RpS5a (Drosophila melanogaster, 289.7); rps-5 (Caenorhabditis elegans, 275.4); RPS5B (Arabidopsis thaliana, 307.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:623393-624070:+ | gene-YJR123W_AKU4011 | rna-NM_001181781.1_AKU4011 | cds-NP_012657.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000076.1:49507-50184:- | gene-YJR123W_BG1 | rna-NM_001181781.1_BG1 | cds-NP_012657.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:639104-639781:+ | gene-YJR123W_Bruggeman | rna-NM_001181781.1_Bruggeman | cds-NP_012657.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:643780-644457:+ | gene-YJR123W_CAT1 | rna-NM_001181781.1_CAT1 | cds-NP_012657.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:635435-636112:+ | gene-YJR123W_CBS1585 | rna-NM_001181781.1_CBS1585 | cds-NP_012657.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:654313-654990:+ | gene-YJR123W_CBS436 | rna-NM_001181781.1_CBS436 | cds-NP_012657.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:622211-622888:+ | gene-YJR123W_CBS6412 | rna-NM_001181781.1_CBS6412 | cds-NP_012657.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:624866-625543:+ | gene-YJR123W_CBS6413 | rna-NM_001181781.1_CBS6413 | cds-NP_012657.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:634259-634936:+ | gene-YJR123W_CENPK1137D | rna-NM_001181781.1_CENPK1137D | cds-NP_012657.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:627808-628485:+ | gene-YJR123W_EthanolRed | rna-NM_001181781.1_EthanolRed | cds-NP_012657.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:639271-639948:+ | gene-YJR123W_FaliES1 | rna-NM_001181781.1_FaliES1 | cds-NP_012657.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:49180-49857:- | gene-YJR123W_JAY291 | rna-NM_001181781.1_JAY291 | cds-NP_012657.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:637897-638574:+ | gene-YJR123W_MUCL30387 | rna-NM_001181781.1_MUCL30387 | cds-NP_012657.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:635623-636300:+ | gene-YJR123W_MUCL30388 | rna-NM_001181781.1_MUCL30388 | cds-NP_012657.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:628917-629594:+ | gene-YJR123W_MUCL39482 | rna-NM_001181781.1_MUCL39482 | cds-NP_012657.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:633408-634085:+ | gene-YJR123W_MUCL42920 | rna-NM_001181781.1_MUCL42920 | cds-NP_012657.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:651880-652557:+ | gene-YJR123W_NCIM3186 | rna-NM_001181781.1_NCIM3186 | cds-NP_012657.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:626468-627145:+ | gene-YJR123W_NCYC1407 | rna-NM_001181781.1_NCYC1407 | cds-NP_012657.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:644663-645340:+ | gene-YJR123W_PE2H3 | rna-NM_001181781.1_PE2H3 | cds-NP_012657.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:638352-639029:+ | gene-YJR123W_PE2H4 | rna-NM_001181781.1_PE2H4 | cds-NP_012657.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:651901-652578:+ | gene-YJR123W_S288C | rna-NM_001181781.1_S288C | cds-NP_012657.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000069.1:49553-50230:- | gene-YJR123W_SA1 | rna-NM_001181781.1_SA1 | cds-NP_012657.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:633202-633879:+ | gene-YJR123W_ThermosaccDry | rna-NM_001181781.1_ThermosaccDry | cds-NP_012657.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:635586-636263:+ | gene-YJR123W_VR1 | rna-NM_001181781.1_VR1 | cds-NP_012657.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:612553-613230:+ | gene-YJR123W_ZTW1 | rna-NM_001181781.1_ZTW1 | cds-NP_012657.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:646836-647513:+ | gene-YJR123W_Sparadoxus | rna-NM_001181781.1_Sparadoxus | cds-NP_012657.1_Sparadoxus | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |