Gene name: RPS31
Reference locus (S288C): YLR167W
Gene biotype: protein_coding
Description: Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog
Top 10 interactors (score): RPP2B (0.999); RPL37B (0.999); RPL12A (0.999); RPL40B (0.999); RPS11A (0.999); RPS10A (0.999); RPL8B (0.999); RPL9B (0.999); RPL1A (0.999); RPL35A (0.999); RPL20A (0.999); RPS3 (0.999); RPS2 (0.999); RPL6A (0.999); RPL15A (0.999); RPS18A (0.999); RPL16A (0.999); RPS14B (0.999); RPL27B (0.999); RPL13A (0.999)
Homologues (species, bitscore): RPS27A (Homo sapiens, 253.8); Rps27a (Mus musculus, 251.9); rps27a (Danio rerio, 251.5); rps27a (Xenopus tropicalis, 226.5); RpS27A (Drosophila melanogaster, 254.6); ubl-1 (Caenorhabditis elegans, 170.2); UBQ6 (Arabidopsis thaliana, 262.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:453050-453508:+ | gene-YLR167W_AKU4011 | rna-NM_001182054.1_AKU4011 | cds-NP_013268.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000177.1:10278-10736:+ | gene-YLR167W_BG1 | rna-NM_001182054.1_BG1 | cds-NP_013268.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:493391-493849:+ | gene-YLR167W_Bruggeman | rna-NM_001182054.1_Bruggeman | cds-NP_013268.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:492921-493379:+ | gene-YLR167W_CAT1 | rna-NM_001182054.1_CAT1 | cds-NP_013268.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:488547-489005:+ | gene-YLR167W_CBS1585 | rna-NM_001182054.1_CBS1585 | cds-NP_013268.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:478687-479145:+ | gene-YLR167W_CBS436 | rna-NM_001182054.1_CBS436 | cds-NP_013268.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:457118-457576:+ | gene-YLR167W_CBS6412 | rna-NM_001182054.1_CBS6412 | cds-NP_013268.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:488853-489311:+ | gene-YLR167W_CBS6413 | rna-NM_001182054.1_CBS6413 | cds-NP_013268.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:483664-484122:+ | gene-YLR167W_CENPK1137D | rna-NM_001182054.1_CENPK1137D | cds-NP_013268.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:452571-453029:+ | gene-YLR167W_EthanolRed | rna-NM_001182054.1_EthanolRed | cds-NP_013268.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:481498-481956:+ | gene-YLR167W_FaliES1 | rna-NM_001182054.1_FaliES1 | cds-NP_013268.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000004.1:8431-8889:+ | gene-YLR167W_JAY291 | rna-NM_001182054.1_JAY291 | cds-NP_013268.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:493412-493870:+ | gene-YLR167W_MUCL30387 | rna-NM_001182054.1_MUCL30387 | cds-NP_013268.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:498344-498802:+ | gene-YLR167W_MUCL30388 | rna-NM_001182054.1_MUCL30388 | cds-NP_013268.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:489544-490002:+ | gene-YLR167W_MUCL39482 | rna-NM_001182054.1_MUCL39482 | cds-NP_013268.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:490116-490574:+ | gene-YLR167W_MUCL42920 | rna-NM_001182054.1_MUCL42920 | cds-NP_013268.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:498921-499379:+ | gene-YLR167W_NCIM3186 | rna-NM_001182054.1_NCIM3186 | cds-NP_013268.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:481968-482426:+ | gene-YLR167W_NCYC1407 | rna-NM_001182054.1_NCYC1407 | cds-NP_013268.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:486218-486676:+ | gene-YLR167W_PE2H3 | rna-NM_001182054.1_PE2H3 | cds-NP_013268.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:485962-486420:+ | gene-YLR167W_PE2H4 | rna-NM_001182054.1_PE2H4 | cds-NP_013268.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:498947-499405:+ | gene-YLR167W_S288C | rna-NM_001182054.1_S288C | cds-NP_013268.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000042.1:8489-8947:+ | gene-YLR167W_SA1 | rna-NM_001182054.1_SA1 | cds-NP_013268.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:484022-484480:+ | gene-YLR167W_ThermosaccDry | rna-NM_001182054.1_ThermosaccDry | cds-NP_013268.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:495331-495789:+ | gene-YLR167W_VR1 | rna-NM_001182054.1_VR1 | cds-NP_013268.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:8391-8849:+ | gene-YLR167W_ZTW1 | rna-NM_001182054.1_ZTW1 | cds-NP_013268.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:470035-470493:+ | gene-YLR167W_Sparadoxus | rna-NM_001182054.1_Sparadoxus | cds-NP_013268.1_Sparadoxus | 96.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |