Gene name: RPS26B
Reference locus (S288C): YER131W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S26, no bacterial homolog; RPS26B has a paralog, RPS26A, that arose from the whole genome duplication; human homolog can partially complement an RPS26A, RPS26B double null mutant; mutations in the human gene are associated with Diamond-Blackfan anemia
Top 10 interactors (score): RPL4A (0.999); RPS6A (0.999); RPS21A (0.999); RPL11A (0.999); RPS13 (0.999); RPS20 (0.999); RPS25B (0.999); RPL2A (0.999); RPS23B (0.999); RPS17A (0.999); RPS30B (0.999); RPS22A (0.999); RPS22B (0.999); RPL32 (0.999); RPL8A (0.999); RPL39 (0.999); RPL18B (0.999); RPL34A (0.999); RPL19B (0.999); RPL42A (0.999)
Homologues (species, bitscore): RPS26 (Homo sapiens, 151.8); Rps26 (Mus musculus, 151.8); rps26 (Danio rerio, 150.6); rps26 (Xenopus tropicalis, 151.8); RpS26 (Drosophila melanogaster, 144.8); rps-26 (Caenorhabditis elegans, 137.9); AT3G56340 (Arabidopsis thaliana, 138.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:417787-418146:+ | gene-YER131W_AKU4011 | rna-NM_001179021.1_AKU4011 | cds-NP_011057.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:7512-7871:- | gene-YER131W_BG1 | rna-NM_001179021.1_BG1 | cds-NP_011057.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:428252-428611:+ | gene-YER131W_Bruggeman | rna-NM_001179021.1_Bruggeman | cds-NP_011057.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:423491-423850:+ | gene-YER131W_CAT1 | rna-NM_001179021.1_CAT1 | cds-NP_011057.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:417182-417541:+ | gene-YER131W_CBS1585 | rna-NM_001179021.1_CBS1585 | cds-NP_011057.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:419925-420284:+ | gene-YER131W_CBS436 | rna-NM_001179021.1_CBS436 | cds-NP_011057.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:416260-416619:+ | gene-YER131W_CBS6412 | rna-NM_001179021.1_CBS6412 | cds-NP_011057.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:423103-423462:+ | gene-YER131W_CBS6413 | rna-NM_001179021.1_CBS6413 | cds-NP_011057.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:421671-422030:+ | gene-YER131W_CENPK1137D | rna-NM_001179021.1_CENPK1137D | cds-NP_011057.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:417630-417989:+ | gene-YER131W_EthanolRed | rna-NM_001179021.1_EthanolRed | cds-NP_011057.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:418111-418470:+ | gene-YER131W_FaliES1 | rna-NM_001179021.1_FaliES1 | cds-NP_011057.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000028.1:26372-26731:+ | gene-YER131W_JAY291 | rna-NM_001179021.1_JAY291 | cds-NP_011057.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:425200-425559:+ | gene-YER131W_MUCL30387 | rna-NM_001179021.1_MUCL30387 | cds-NP_011057.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:420147-420506:+ | gene-YER131W_MUCL30388 | rna-NM_001179021.1_MUCL30388 | cds-NP_011057.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:416207-416566:+ | gene-YER131W_MUCL39482 | rna-NM_001179021.1_MUCL39482 | cds-NP_011057.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:424693-425052:+ | gene-YER131W_MUCL42920 | rna-NM_001179021.1_MUCL42920 | cds-NP_011057.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:423951-424310:+ | gene-YER131W_NCIM3186 | rna-NM_001179021.1_NCIM3186 | cds-NP_011057.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:421740-422099:+ | gene-YER131W_NCYC1407 | rna-NM_001179021.1_NCYC1407 | cds-NP_011057.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:432323-432682:+ | gene-YER131W_PE2H3 | rna-NM_001179021.1_PE2H3 | cds-NP_011057.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:422264-422623:+ | gene-YER131W_PE2H4 | rna-NM_001179021.1_PE2H4 | cds-NP_011057.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:423952-424311:+ | gene-YER131W_S288C | rna-NM_001179021.1_S288C | cds-NP_011057.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:133507-133866:+ | gene-YER131W_SA1 | rna-NM_001179021.1_SA1 | cds-NP_011057.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:418909-419268:+ | gene-YER131W_ThermosaccDry | rna-NM_001179021.1_ThermosaccDry | cds-NP_011057.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:419957-420316:+ | gene-YER131W_VR1 | rna-NM_001179021.1_VR1 | cds-NP_011057.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:416037-416396:+ | gene-YER131W_ZTW1 | rna-NM_001179021.1_ZTW1 | cds-NP_011057.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:419923-420282:+ | gene-YER131W_Sparadoxus | rna-NM_001179021.1_Sparadoxus | cds-NP_011057.1_Sparadoxus | 94.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |