Gene name: RPS26A
Reference locus (S288C): YGL189C
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S26, no bacterial homolog; RPS26A has a paralog, RPS26B, that arose from the whole genome duplication; human homolog can partially complement an RPS26A, RPS26B double null mutant; mutations in the human gene are associated with Diamond-Blackfan anemia
Top 10 interactors (score): RPL15A (0.999); RPL16A (0.999); RPS18A (0.999); RPS16A (0.999); RPL31A (0.999); RPS19B (0.999); RPL20A (0.999); RPS2 (0.999); RPS3 (0.999); RPL40B (0.999); RPL9B (0.999); RPL35A (0.999); TSR2 (0.999); RPS9A (0.999); RPL26A (0.999); RPS9B (0.999); RPS28A (0.999); RPL28 (0.999); RPL12A (0.999); RPL36B (0.999)
Homologues (species, bitscore): RPS26 (Homo sapiens, 151.4); Rps26 (Mus musculus, 151.4); rps26 (Danio rerio, 150.6); rps26 (Xenopus tropicalis, 151.8); RpS26 (Drosophila melanogaster, 144.8); rps-26 (Caenorhabditis elegans, 137.9); AT3G56340 (Arabidopsis thaliana, 138.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:150767-151126:- | gene-YGL189C_AKU4011 | rna-NM_001181054.1_AKU4011 | cds-NP_011326.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:259320-259679:+ | gene-YGL189C_BG1 | rna-NM_001181054.1_BG1 | cds-NP_011326.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:153001-153360:- | gene-YGL189C_Bruggeman | rna-NM_001181054.1_Bruggeman | cds-NP_011326.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:148863-149222:- | gene-YGL189C_CAT1 | rna-NM_001181054.1_CAT1 | cds-NP_011326.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:153906-154265:- | gene-YGL189C_CBS1585 | rna-NM_001181054.1_CBS1585 | cds-NP_011326.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:148881-149240:- | gene-YGL189C_CBS436 | rna-NM_001181054.1_CBS436 | cds-NP_011326.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:140684-141043:- | gene-YGL189C_CBS6412 | rna-NM_001181054.1_CBS6412 | cds-NP_011326.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:148218-148577:- | gene-YGL189C_CBS6413 | rna-NM_001181054.1_CBS6413 | cds-NP_011326.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:148422-148781:- | gene-YGL189C_CENPK1137D | rna-NM_001181054.1_CENPK1137D | cds-NP_011326.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:140750-141109:- | gene-YGL189C_EthanolRed | rna-NM_001181054.1_EthanolRed | cds-NP_011326.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:141750-142109:- | gene-YGL189C_FaliES1 | rna-NM_001181054.1_FaliES1 | cds-NP_011326.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:67072-67431:- | gene-YGL189C_JAY291 | rna-NM_001181054.1_JAY291 | cds-NP_011326.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:150237-150596:- | gene-YGL189C_MUCL30387 | rna-NM_001181054.1_MUCL30387 | cds-NP_011326.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:153338-153697:- | gene-YGL189C_MUCL30388 | rna-NM_001181054.1_MUCL30388 | cds-NP_011326.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:150916-151275:- | gene-YGL189C_MUCL39482 | rna-NM_001181054.1_MUCL39482 | cds-NP_011326.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:153544-153903:- | gene-YGL189C_MUCL42920 | rna-NM_001181054.1_MUCL42920 | cds-NP_011326.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:148229-148588:- | gene-YGL189C_NCIM3186 | rna-NM_001181054.1_NCIM3186 | cds-NP_011326.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:142397-142756:- | gene-YGL189C_NCYC1407 | rna-NM_001181054.1_NCYC1407 | cds-NP_011326.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:144384-144743:- | gene-YGL189C_PE2H3 | rna-NM_001181054.1_PE2H3 | cds-NP_011326.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:143932-144291:- | gene-YGL189C_PE2H4 | rna-NM_001181054.1_PE2H4 | cds-NP_011326.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:148229-148588:- | gene-YGL189C_S288C | rna-NM_001181054.1_S288C | cds-NP_011326.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:7985-8344:- | gene-YGL189C_SA1 | rna-NM_001181054.1_SA1 | cds-NP_011326.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:142012-142371:- | gene-YGL189C_ThermosaccDry | rna-NM_001181054.1_ThermosaccDry | cds-NP_011326.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:149288-149647:- | gene-YGL189C_VR1 | rna-NM_001181054.1_VR1 | cds-NP_011326.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:140549-140908:- | gene-YGL189C_ZTW1 | rna-NM_001181054.1_ZTW1 | cds-NP_011326.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:147408-147767:- | gene-YGL189C_Sparadoxus | rna-NM_001181054.1_Sparadoxus | cds-NP_011326.1_Sparadoxus | 98.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |