Gene name: RPS24B
Reference locus (S288C): YIL069C
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24B has a paralog, RPS24A, that arose from the whole genome duplication
Top 10 interactors (score): RPL24A (0.999); RPL18B (0.999); RPL34A (0.999); RPL39 (0.999); RPP2A (0.999); RPS30A (0.999); RPL20B (0.999); RPL17B (0.999); RPL29 (0.999); RPS17B (0.999); RPS27A (0.999); RPS26A (0.999); RPL23A (0.999); RPL17A (0.999); RPS21B (0.999); RPL40A (0.999); RPL33A (0.999); RPS8B (0.999); RPS19A (0.999); RPP0 (0.999)
Homologues (species, bitscore): RPS24 (Homo sapiens, 156.0); Rps24 (Mus musculus, 156.4); rps24 (Danio rerio, 154.1); rps24 (Xenopus tropicalis, 156.4); RpS24 (Drosophila melanogaster, 143.7); rps-24 (Caenorhabditis elegans, 154.5); AT3G04920 (Arabidopsis thaliana, 154.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:228222-229039:- | gene-YIL069C_AKU4011 | rna-NM_001179419.1_AKU4011 | cds-NP_012195.1_AKU4011 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:90155-90971:- | gene-YIL069C_BG1 | rna-NM_001179419.1_BG1 | cds-NP_012195.1_BG1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:233637-234454:- | gene-YIL069C_Bruggeman | rna-NM_001179419.1_Bruggeman | cds-NP_012195.1_Bruggeman | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:223917-224733:- | gene-YIL069C_CAT1 | rna-NM_001179419.1_CAT1 | cds-NP_012195.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:227793-228610:- | gene-YIL069C_CBS1585 | rna-NM_001179419.1_CBS1585 | cds-NP_012195.1_CBS1585 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:223844-224660:- | gene-YIL069C_CBS436 | rna-NM_001179419.1_CBS436 | cds-NP_012195.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:225170-225987:- | gene-YIL069C_CBS6412 | rna-NM_001179419.1_CBS6412 | cds-NP_012195.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:219713-220530:- | gene-YIL069C_CBS6413 | rna-NM_001179419.1_CBS6413 | cds-NP_012195.1_CBS6413 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:223257-224072:- | gene-YIL069C_CENPK1137D | rna-NM_001179419.1_CENPK1137D | cds-NP_012195.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:212518-213334:- | gene-YIL069C_EthanolRed | rna-NM_001179419.1_EthanolRed | cds-NP_012195.1_EthanolRed | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:229427-230243:- | gene-YIL069C_FaliES1 | rna-NM_001179419.1_FaliES1 | cds-NP_012195.1_FaliES1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:67890-68418:+ | gene-YIL069C_JAY291 | rna-NM_001179419.1_JAY291 | cds-NP_012195.1_JAY291 | 29.4 | 29.4 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:231857-232673:- | gene-YIL069C_MUCL30387 | rna-NM_001179419.1_MUCL30387 | cds-NP_012195.1_MUCL30387 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:228466-229282:- | gene-YIL069C_MUCL30388 | rna-NM_001179419.1_MUCL30388 | cds-NP_012195.1_MUCL30388 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:228640-229457:- | gene-YIL069C_MUCL39482 | rna-NM_001179419.1_MUCL39482 | cds-NP_012195.1_MUCL39482 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:232004-232821:- | gene-YIL069C_MUCL42920 | rna-NM_001179419.1_MUCL42920 | cds-NP_012195.1_MUCL42920 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:231553-232369:- | gene-YIL069C_NCIM3186 | rna-NM_001179419.1_NCIM3186 | cds-NP_012195.1_NCIM3186 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:232917-233734:- | gene-YIL069C_NCYC1407 | rna-NM_001179419.1_NCYC1407 | cds-NP_012195.1_NCYC1407 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:226899-227715:- | gene-YIL069C_PE2H3 | rna-NM_001179419.1_PE2H3 | cds-NP_012195.1_PE2H3 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:221615-222431:- | gene-YIL069C_PE2H4 | rna-NM_001179419.1_PE2H4 | cds-NP_012195.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:231553-232369:- | gene-YIL069C_S288C | rna-NM_001179419.1_S288C | cds-NP_012195.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:93464-94280:+ | gene-YIL069C_SA1 | rna-NM_001179419.1_SA1 | cds-NP_012195.1_SA1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:228090-228906:- | gene-YIL069C_ThermosaccDry | rna-NM_001179419.1_ThermosaccDry | cds-NP_012195.1_ThermosaccDry | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:225773-226589:- | gene-YIL069C_VR1 | rna-NM_001179419.1_VR1 | cds-NP_012195.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:202352-203168:- | gene-YIL069C_ZTW1 | rna-NM_001179419.1_ZTW1 | cds-NP_012195.1_ZTW1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:226456-227276:- | gene-YIL069C_Sparadoxus | rna-NM_001179419.1_Sparadoxus | cds-NP_012195.1_Sparadoxus | 96.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |