Gene name: RPS24A
Reference locus (S288C): YER074W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24A has a paralog, RPS24B, that arose from the whole genome duplication
Top 10 interactors (score): RPL13B (0.999); RPS8A (0.999); RPS10A (0.999); RPS11A (0.999); RPS12 (0.999); RPL19A (0.999); RPS4B (0.999); RPL30 (0.999); RPL33B (0.999); RPS16B (0.999); RPS4A (0.999); RPS10B (0.999); RPL20A (0.999); RPL35A (0.999); RPL9B (0.999); RPL40B (0.999); RPP2B (0.999); RPL12A (0.999); RPL34B (0.999); RPS23A (0.999)
Homologues (species, bitscore): RPS24 (Homo sapiens, 156.0); Rps24 (Mus musculus, 156.4); rps24 (Danio rerio, 154.1); rps24 (Xenopus tropicalis, 156.4); RpS24 (Drosophila melanogaster, 143.7); rps-24 (Caenorhabditis elegans, 154.5); AT3G04920 (Arabidopsis thaliana, 154.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:300111-300983:+ | gene-YER074W_AKU4011 | rna-NM_001178965.3_AKU4011 | cds-NP_010997.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:124821-125694:- | gene-YER074W_BG1 | rna-NM_001178965.3_BG1 | cds-NP_010997.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:309698-310571:+ | gene-YER074W_Bruggeman | rna-NM_001178965.3_Bruggeman | cds-NP_010997.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:303550-304424:+ | gene-YER074W_CAT1 | rna-NM_001178965.3_CAT1 | cds-NP_010997.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:299964-300838:+ | gene-YER074W_CBS1585 | rna-NM_001178965.3_CBS1585 | cds-NP_010997.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:302108-302981:+ | gene-YER074W_CBS436 | rna-NM_001178965.3_CBS436 | cds-NP_010997.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:299431-300305:+ | gene-YER074W_CBS6412 | rna-NM_001178965.3_CBS6412 | cds-NP_010997.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:305416-306288:+ | gene-YER074W_CBS6413 | rna-NM_001178965.3_CBS6413 | cds-NP_010997.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:304114-304987:+ | gene-YER074W_CENPK1137D | rna-NM_001178965.3_CENPK1137D | cds-NP_010997.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:300443-301317:+ | gene-YER074W_EthanolRed | rna-NM_001178965.3_EthanolRed | cds-NP_010997.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:300888-301762:+ | gene-YER074W_FaliES1 | rna-NM_001178965.3_FaliES1 | cds-NP_010997.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000153.1:15952-16825:+ | gene-YER074W_JAY291 | rna-NM_001178965.3_JAY291 | cds-NP_010997.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:305094-305967:+ | gene-YER074W_MUCL30387 | rna-NM_001178965.3_MUCL30387 | cds-NP_010997.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:300765-301638:+ | gene-YER074W_MUCL30388 | rna-NM_001178965.3_MUCL30388 | cds-NP_010997.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:298992-299865:+ | gene-YER074W_MUCL39482 | rna-NM_001178965.3_MUCL39482 | cds-NP_010997.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:306233-307106:+ | gene-YER074W_MUCL42920 | rna-NM_001178965.3_MUCL42920 | cds-NP_010997.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:306322-307195:+ | gene-YER074W_NCIM3186 | rna-NM_001178965.3_NCIM3186 | cds-NP_010997.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:304063-304935:+ | gene-YER074W_NCYC1407 | rna-NM_001178965.3_NCYC1407 | cds-NP_010997.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:314705-315578:+ | gene-YER074W_PE2H3 | rna-NM_001178965.3_PE2H3 | cds-NP_010997.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:304646-305519:+ | gene-YER074W_PE2H4 | rna-NM_001178965.3_PE2H4 | cds-NP_010997.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:306323-307196:+ | gene-YER074W_S288C | rna-NM_001178965.3_S288C | cds-NP_010997.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000023.1:15965-16838:+ | gene-YER074W_SA1 | rna-NM_001178965.3_SA1 | cds-NP_010997.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:301685-302559:+ | gene-YER074W_ThermosaccDry | rna-NM_001178965.3_ThermosaccDry | cds-NP_010997.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:302386-303259:+ | gene-YER074W_VR1 | rna-NM_001178965.3_VR1 | cds-NP_010997.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:298856-299730:+ | gene-YER074W_ZTW1 | rna-NM_001178965.3_ZTW1 | cds-NP_010997.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:302218-303119:+ | gene-YER074W_Sparadoxus | rna-NM_001178965.3_Sparadoxus | cds-NP_010997.3_Sparadoxus | 98.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |