Gene name: RPS22B
Reference locus (S288C): YLR367W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15A and bacterial S8; RPS22B has a paralog, RPS22A, that arose from the whole genome duplication
Top 10 interactors (score): RPS18A (0.999); RPS30A (0.999); RPS21B (0.999); RPS22A (0.999); RPS17B (0.999); RPS26A (0.999); RPS27A (0.999); RPS8B (0.999); RPL33A (0.999); RPS19A (0.999); RPL11B (0.999); RPS29B (0.999); RPL3 (0.999); RPS6A (0.999); RPS26B (0.999); RPS25B (0.999); RPS13 (0.999); RPL42A (0.999); RPL18B (0.999); RPL39 (0.999)
Homologues (species, bitscore): RPS15A (Homo sapiens, 217.2); Rps15a (Mus musculus, 217.2); rps15a (Danio rerio, 218.4); rps15a (Xenopus tropicalis, 176.8); RpS15Aa (Drosophila melanogaster, 224.2); rps-22 (Caenorhabditis elegans, 214.5); RPS15A (Arabidopsis thaliana, 221.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:805988-806854:+ | gene-YLR367W_AKU4011 | rna-NM_001182256.1_AKU4011 | cds-NP_013471.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:38129-39004:+ | gene-YLR367W_BG1 | rna-NM_001182256.1_BG1 | cds-NP_013471.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:844301-845176:+ | gene-YLR367W_Bruggeman | rna-NM_001182256.1_Bruggeman | cds-NP_013471.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:839805-840680:+ | gene-YLR367W_CAT1 | rna-NM_001182256.1_CAT1 | cds-NP_013471.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:840981-841847:+ | gene-YLR367W_CBS1585 | rna-NM_001182256.1_CBS1585 | cds-NP_013471.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:825210-826085:+ | gene-YLR367W_CBS436 | rna-NM_001182256.1_CBS436 | cds-NP_013471.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:877987-878853:+ | gene-YLR367W_CBS6412 | rna-NM_001182256.1_CBS6412 | cds-NP_013471.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:841871-842737:+ | gene-YLR367W_CBS6413 | rna-NM_001182256.1_CBS6413 | cds-NP_013471.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:841175-842041:+ | gene-YLR367W_CENPK1137D | rna-NM_001182256.1_CENPK1137D | cds-NP_013471.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:798549-799424:+ | gene-YLR367W_EthanolRed | rna-NM_001182256.1_EthanolRed | cds-NP_013471.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:827354-828229:+ | gene-YLR367W_FaliES1 | rna-NM_001182256.1_FaliES1 | cds-NP_013471.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000161.1:37946-38821:+ | gene-YLR367W_JAY291 | rna-NM_001182256.1_JAY291 | cds-NP_013471.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:841718-842593:+ | gene-YLR367W_MUCL30387 | rna-NM_001182256.1_MUCL30387 | cds-NP_013471.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:847335-848210:+ | gene-YLR367W_MUCL30388 | rna-NM_001182256.1_MUCL30388 | cds-NP_013471.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:842200-843066:+ | gene-YLR367W_MUCL39482 | rna-NM_001182256.1_MUCL39482 | cds-NP_013471.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:837474-838349:+ | gene-YLR367W_MUCL42920 | rna-NM_001182256.1_MUCL42920 | cds-NP_013471.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:856416-857291:+ | gene-YLR367W_NCIM3186 | rna-NM_001182256.1_NCIM3186 | cds-NP_013471.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:851420-852286:+ | gene-YLR367W_NCYC1407 | rna-NM_001182256.1_NCYC1407 | cds-NP_013471.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:838367-839242:+ | gene-YLR367W_PE2H3 | rna-NM_001182256.1_PE2H3 | cds-NP_013471.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:838111-838986:+ | gene-YLR367W_PE2H4 | rna-NM_001182256.1_PE2H4 | cds-NP_013471.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:856442-857317:+ | gene-YLR367W_S288C | rna-NM_001182256.1_S288C | cds-NP_013471.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:191374-192249:- | gene-YLR367W_SA1 | rna-NM_001182256.1_SA1 | cds-NP_013471.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:830195-831061:+ | gene-YLR367W_ThermosaccDry | rna-NM_001182256.1_ThermosaccDry | cds-NP_013471.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:843457-844332:+ | gene-YLR367W_VR1 | rna-NM_001182256.1_VR1 | cds-NP_013471.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:167635-168510:+ | gene-YLR367W_ZTW1 | rna-NM_001182256.1_ZTW1 | cds-NP_013471.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:816315-817197:+ | gene-YLR367W_Sparadoxus | rna-NM_001182256.1_Sparadoxus | cds-NP_013471.1_Sparadoxus | 96.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |