Gene name: RPS2
Reference locus (S288C): YGL123W
Gene biotype: protein_coding
Description: Protein component of the small (40S) subunit; essential for control of translational accuracy; phosphorylation by C-terminal domain kinase I (CTDK-I) enhances translational accuracy; methylated on one or more arginine residues by Hmt1p; homologous to mammalian ribosomal protein S2 and bacterial S5
Top 10 interactors (score): RPL19A (0.999); RPS12 (0.999); RPS11A (0.999); RPS10A (0.999); RPL33B (0.999); RPS16B (0.999); RPL13B (0.999); RPS8A (0.999); RPL13A (0.999); RPL1A (0.999); RPL12A (0.999); RPP2B (0.999); RPS10B (0.999); RPL21B (0.999); RPS4A (0.999); RPS23A (0.999); RPL34B (0.999); RPL30 (0.999); RPS4B (0.999); RPL4B (0.999)
Homologues (species, bitscore): RPS2 (Homo sapiens, 297.0); Rps2 (Mus musculus, 297.4); rps2 (Danio rerio, 300.4); rps2 (Xenopus tropicalis, 299.3); RpS2 (Drosophila melanogaster, 312.8); rps-2 (Caenorhabditis elegans, 294.3); AT2G41840 (Arabidopsis thaliana, 318.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:280430-281194:+ | gene-YGL123W_AKU4011 | rna-NM_001180988.1_AKU4011 | cds-NP_011392.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:123949-124713:- | gene-YGL123W_BG1 | rna-NM_001180988.1_BG1 | cds-NP_011392.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:283135-283899:+ | gene-YGL123W_Bruggeman | rna-NM_001180988.1_Bruggeman | cds-NP_011392.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:278714-279478:+ | gene-YGL123W_CAT1 | rna-NM_001180988.1_CAT1 | cds-NP_011392.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:283755-284519:+ | gene-YGL123W_CBS1585 | rna-NM_001180988.1_CBS1585 | cds-NP_011392.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:278667-279431:+ | gene-YGL123W_CBS436 | rna-NM_001180988.1_CBS436 | cds-NP_011392.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:269034-269798:+ | gene-YGL123W_CBS6412 | rna-NM_001180988.1_CBS6412 | cds-NP_011392.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:278633-279397:+ | gene-YGL123W_CBS6413 | rna-NM_001180988.1_CBS6413 | cds-NP_011392.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:277876-278640:+ | gene-YGL123W_CENPK1137D | rna-NM_001180988.1_CENPK1137D | cds-NP_011392.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:269954-270718:+ | gene-YGL123W_EthanolRed | rna-NM_001180988.1_EthanolRed | cds-NP_011392.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:272135-272899:+ | gene-YGL123W_FaliES1 | rna-NM_001180988.1_FaliES1 | cds-NP_011392.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:28734-29498:- | gene-YGL123W_JAY291 | rna-NM_001180988.1_JAY291 | cds-NP_011392.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:280105-280869:+ | gene-YGL123W_MUCL30387 | rna-NM_001180988.1_MUCL30387 | cds-NP_011392.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:283224-283988:+ | gene-YGL123W_MUCL30388 | rna-NM_001180988.1_MUCL30388 | cds-NP_011392.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:280853-281617:+ | gene-YGL123W_MUCL39482 | rna-NM_001180988.1_MUCL39482 | cds-NP_011392.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:284097-284861:+ | gene-YGL123W_MUCL42920 | rna-NM_001180988.1_MUCL42920 | cds-NP_011392.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:277617-278381:+ | gene-YGL123W_NCIM3186 | rna-NM_001180988.1_NCIM3186 | cds-NP_011392.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:272342-273106:+ | gene-YGL123W_NCYC1407 | rna-NM_001180988.1_NCYC1407 | cds-NP_011392.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:273731-274495:+ | gene-YGL123W_PE2H3 | rna-NM_001180988.1_PE2H3 | cds-NP_011392.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:278729-279493:+ | gene-YGL123W_PE2H4 | rna-NM_001180988.1_PE2H4 | cds-NP_011392.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:277617-278381:+ | gene-YGL123W_S288C | rna-NM_001180988.1_S288C | cds-NP_011392.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:22498-23262:+ | gene-YGL123W_SA1 | rna-NM_001180988.1_SA1 | cds-NP_011392.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:272347-273111:+ | gene-YGL123W_ThermosaccDry | rna-NM_001180988.1_ThermosaccDry | cds-NP_011392.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:382458-383222:+ | gene-YGL123W_VR1 | rna-NM_001180988.1_VR1 | cds-NP_011392.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:269918-270682:+ | gene-YGL123W_ZTW1 | rna-NM_001180988.1_ZTW1 | cds-NP_011392.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:275939-276703:+ | gene-YGL123W_Sparadoxus | rna-NM_001180988.1_Sparadoxus | cds-NP_011392.1_Sparadoxus | 98.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |