Gene name: RPS14A
Reference locus (S288C): YCR031C
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14A has a paralog, RPS14B, that arose from the whole genome duplication
Top 10 interactors (score): RPS26A (0.999); RPL24A (0.999); RPL33A (0.999); RPS8B (0.999); RPL23A (0.999); RPP0 (0.999); RPS19A (0.999); RPL3 (0.999); RPS26B (0.999); RPS6A (0.999); RPL4A (0.999); RPS29B (0.999); RPL11B (0.999); RPS27A (0.999); RPL17A (0.999); RPL29 (0.999); RPS30A (0.999); RPS21B (0.999); RPL40A (0.999); RPS17B (0.999)
Homologues (species, bitscore): RPS14 (Homo sapiens, 234.6); Rps14 (Mus musculus, 234.6); rps14 (Danio rerio, 235.7); LOC549476 (Xenopus tropicalis, 234.6); RpS14a (Drosophila melanogaster, 235.0); rps-14 (Caenorhabditis elegans, 229.9); AT3G11510 (Arabidopsis thaliana, 232.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:170964-171684:- | gene-YCR031C_AKU4011 | rna-NM_001178745.1_AKU4011 | cds-NP_009960.2_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:25459-26178:- | gene-YCR031C_BG1 | rna-NM_001178745.1_BG1 | cds-NP_009960.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:167254-167973:- | gene-YCR031C_Bruggeman | rna-NM_001178745.1_Bruggeman | cds-NP_009960.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:178396-179115:- | gene-YCR031C_CAT1 | rna-NM_001178745.1_CAT1 | cds-NP_009960.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:165725-166445:- | gene-YCR031C_CBS1585 | rna-NM_001178745.1_CBS1585 | cds-NP_009960.2_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:177372-178091:- | gene-YCR031C_CBS436 | rna-NM_001178745.1_CBS436 | cds-NP_009960.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:159578-160298:- | gene-YCR031C_CBS6412 | rna-NM_001178745.1_CBS6412 | cds-NP_009960.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:171902-172622:- | gene-YCR031C_CBS6413 | rna-NM_001178745.1_CBS6413 | cds-NP_009960.2_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:176841-177561:- | gene-YCR031C_CENPK1137D | rna-NM_001178745.1_CENPK1137D | cds-NP_009960.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:168725-169446:- | gene-YCR031C_EthanolRed | rna-NM_001178745.1_EthanolRed | cds-NP_009960.2_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:171841-172562:- | gene-YCR031C_FaliES1 | rna-NM_001178745.1_FaliES1 | cds-NP_009960.2_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000102.1:8119-8839:- | gene-YCR031C_JAY291 | rna-NM_001178745.1_JAY291 | cds-NP_009960.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:164491-165210:- | gene-YCR031C_MUCL30387 | rna-NM_001178745.1_MUCL30387 | cds-NP_009960.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:164280-164999:- | gene-YCR031C_MUCL30388 | rna-NM_001178745.1_MUCL30388 | cds-NP_009960.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:172049-172769:- | gene-YCR031C_MUCL39482 | rna-NM_001178745.1_MUCL39482 | cds-NP_009960.2_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:169843-170562:- | gene-YCR031C_MUCL42920 | rna-NM_001178745.1_MUCL42920 | cds-NP_009960.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:177132-177852:- | gene-YCR031C_NCIM3186 | rna-NM_001178745.1_NCIM3186 | cds-NP_009960.2_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:173812-174533:- | gene-YCR031C_NCYC1407 | rna-NM_001178745.1_NCYC1407 | cds-NP_009960.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:182858-183579:- | gene-YCR031C_PE2H3 | rna-NM_001178745.1_PE2H3 | cds-NP_009960.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:177479-178200:- | gene-YCR031C_PE2H4 | rna-NM_001178745.1_PE2H4 | cds-NP_009960.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:177500-178220:- | gene-YCR031C_S288C | rna-NM_001178745.1_S288C | cds-NP_009960.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000083.1:25006-25727:- | gene-YCR031C_SA1 | rna-NM_001178745.1_SA1 | cds-NP_009960.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:172617-173338:- | gene-YCR031C_ThermosaccDry | rna-NM_001178745.1_ThermosaccDry | cds-NP_009960.2_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:183634-184353:- | gene-YCR031C_VR1 | rna-NM_001178745.1_VR1 | cds-NP_009960.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:170875-171594:- | gene-YCR031C_ZTW1 | rna-NM_001178745.1_ZTW1 | cds-NP_009960.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:205041-205752:- | gene-YCR031C_Sparadoxus | rna-NM_001178745.1_Sparadoxus | cds-NP_009960.2_Sparadoxus | 97.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |