Gene name: RPS10A
Reference locus (S288C): YOR293W
Gene biotype: protein_coding
Description: Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10A has a paralog, RPS10B, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia
Top 10 interactors (score): RPS15 (0.999); RPS27B (0.999); RPL31B (0.999); RPL37A (0.999); RPL38 (0.999); RPS5 (0.999); RPL36B (0.999); RPL2B (0.999); RPL6B (0.999); RPS11B (0.999); RPP1A (0.999); RPS14A (0.999); RPS19B (0.999); RPL31A (0.999); RPS16A (0.999); RPL28 (0.999); RPS28A (0.999); RPL26A (0.999); RPS9B (0.999); RPS9A (0.999)
Homologues (species, bitscore): RPS10 (Homo sapiens, 120.2); Rps10 (Mus musculus, 119.8); rps10 (Danio rerio, 116.3); rps10 (Xenopus tropicalis, 120.9); RpS10b (Drosophila melanogaster, 115.5); rps-10 (Caenorhabditis elegans, 100.9); AT5G52650 (Arabidopsis thaliana, 115.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:857557-858310:+ | gene-YOR293W_AKU4011 | rna-NM_001183712.1_AKU4011 | cds-NP_014936.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:259569-260354:+ | gene-YOR293W_BG1 | rna-NM_001183712.1_BG1 | cds-NP_014936.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:843001-843754:+ | gene-YOR293W_Bruggeman | rna-NM_001183712.1_Bruggeman | cds-NP_014936.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:843726-844479:+ | gene-YOR293W_CAT1 | rna-NM_001183712.1_CAT1 | cds-NP_014936.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:841391-842144:+ | gene-YOR293W_CBS1585 | rna-NM_001183712.1_CBS1585 | cds-NP_014936.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:839234-839987:+ | gene-YOR293W_CBS436 | rna-NM_001183712.1_CBS436 | cds-NP_014936.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:837089-837842:+ | gene-YOR293W_CBS6412 | rna-NM_001183712.1_CBS6412 | cds-NP_014936.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:846284-847037:+ | gene-YOR293W_CBS6413 | rna-NM_001183712.1_CBS6413 | cds-NP_014936.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:866887-867641:+ | gene-YOR293W_CENPK1137D | rna-NM_001183712.1_CENPK1137D | cds-NP_014936.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:833466-834219:+ | gene-YOR293W_EthanolRed | rna-NM_001183712.1_EthanolRed | cds-NP_014936.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:839084-839837:+ | gene-YOR293W_FaliES1 | rna-NM_001183712.1_FaliES1 | cds-NP_014936.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000078.1:163345-164098:- | gene-YOR293W_JAY291 | rna-NM_001183712.1_JAY291 | cds-NP_014936.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:847256-848009:+ | gene-YOR293W_MUCL30387 | rna-NM_001183712.1_MUCL30387 | cds-NP_014936.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:855228-855981:+ | gene-YOR293W_MUCL30388 | rna-NM_001183712.1_MUCL30388 | cds-NP_014936.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:847919-848672:+ | gene-YOR293W_MUCL39482 | rna-NM_001183712.1_MUCL39482 | cds-NP_014936.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:857417-858171:+ | gene-YOR293W_MUCL42920 | rna-NM_001183712.1_MUCL42920 | cds-NP_014936.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:866987-867741:+ | gene-YOR293W_NCIM3186 | rna-NM_001183712.1_NCIM3186 | cds-NP_014936.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:848932-849685:+ | gene-YOR293W_NCYC1407 | rna-NM_001183712.1_NCYC1407 | cds-NP_014936.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:847219-847972:+ | gene-YOR293W_PE2H3 | rna-NM_001183712.1_PE2H3 | cds-NP_014936.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:863569-864322:+ | gene-YOR293W_PE2H4 | rna-NM_001183712.1_PE2H4 | cds-NP_014936.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:867098-867852:+ | gene-YOR293W_S288C | rna-NM_001183712.1_S288C | cds-NP_014936.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:276784-277538:+ | gene-YOR293W_SA1 | rna-NM_001183712.1_SA1 | cds-NP_014936.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:838267-839020:+ | gene-YOR293W_ThermosaccDry | rna-NM_001183712.1_ThermosaccDry | cds-NP_014936.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:901663-902416:+ | gene-YOR293W_VR1 | rna-NM_001183712.1_VR1 | cds-NP_014936.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:571155-571908:+ | gene-YOR293W_ZTW1 | rna-NM_001183712.1_ZTW1 | cds-NP_014936.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:845083-845844:+ | gene-YOR293W_Sparadoxus | rna-NM_001183712.1_Sparadoxus | cds-NP_014936.1_Sparadoxus | 98.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |