Gene name: RPR2
Reference locus (S288C): YIR015W
Gene biotype: protein_coding
Description: Ribonuclease P protein subunit RPR2; Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): POP5 (0.999); POP8 (0.999); POP6 (0.999); RPP1 (0.999); POP4 (0.999); POP1 (0.999); POP7 (0.998); POP3 (0.989); RPM2 (0.984); RMP1 (0.984); SEN15 (0.973); SEN2 (0.968); SEN54 (0.9); MMS4 (0.9); SEN34 (0.9); MUS81 (0.9); SNU13 (0.878); YSW1 (0.748); TFB2 (0.682); SNM1 (0.671)
Homologues (species, bitscore): rpp21 (Xenopus tropicalis, 55.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:381289-381723:+ | gene-YIR015W_AKU4011 | rna-NM_001179537.1_AKU4011 | cds-NP_012280.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:44851-45285:- | gene-YIR015W_BG1 | rna-NM_001179537.1_BG1 | cds-NP_012280.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:385711-386145:+ | gene-YIR015W_Bruggeman | rna-NM_001179537.1_Bruggeman | cds-NP_012280.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:372421-372855:+ | gene-YIR015W_CAT1 | rna-NM_001179537.1_CAT1 | cds-NP_012280.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:381318-381752:+ | gene-YIR015W_CBS1585 | rna-NM_001179537.1_CBS1585 | cds-NP_012280.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:373992-374426:+ | gene-YIR015W_CBS436 | rna-NM_001179537.1_CBS436 | cds-NP_012280.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:376807-377241:+ | gene-YIR015W_CBS6412 | rna-NM_001179537.1_CBS6412 | cds-NP_012280.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:373399-373833:+ | gene-YIR015W_CBS6413 | rna-NM_001179537.1_CBS6413 | cds-NP_012280.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:374003-374437:+ | gene-YIR015W_CENPK1137D | rna-NM_001179537.1_CENPK1137D | cds-NP_012280.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:364371-364805:+ | gene-YIR015W_EthanolRed | rna-NM_001179537.1_EthanolRed | cds-NP_012280.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:383097-383531:+ | gene-YIR015W_FaliES1 | rna-NM_001179537.1_FaliES1 | cds-NP_012280.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000009.1:8433-8867:- | gene-YIR015W_JAY291 | rna-NM_001179537.1_JAY291 | cds-NP_012280.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:382954-383366:+ | gene-YIR015W_MUCL30387 | rna-NM_001179537.1_MUCL30387 | cds-NP_012280.1_MUCL30387 | 91.0 | 94.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:379733-380167:+ | gene-YIR015W_MUCL30388 | rna-NM_001179537.1_MUCL30388 | cds-NP_012280.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:381958-382392:+ | gene-YIR015W_MUCL39482 | rna-NM_001179537.1_MUCL39482 | cds-NP_012280.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:385521-385955:+ | gene-YIR015W_MUCL42920 | rna-NM_001179537.1_MUCL42920 | cds-NP_012280.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:381948-382382:+ | gene-YIR015W_NCIM3186 | rna-NM_001179537.1_NCIM3186 | cds-NP_012280.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:386181-386615:+ | gene-YIR015W_NCYC1407 | rna-NM_001179537.1_NCYC1407 | cds-NP_012280.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:376005-376439:+ | gene-YIR015W_PE2H3 | rna-NM_001179537.1_PE2H3 | cds-NP_012280.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:370711-371145:+ | gene-YIR015W_PE2H4 | rna-NM_001179537.1_PE2H4 | cds-NP_012280.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:381948-382382:+ | gene-YIR015W_S288C | rna-NM_001179537.1_S288C | cds-NP_012280.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000066.1:56806-57240:+ | gene-YIR015W_SA1 | rna-NM_001179537.1_SA1 | cds-NP_012280.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:380702-381136:+ | gene-YIR015W_ThermosaccDry | rna-NM_001179537.1_ThermosaccDry | cds-NP_012280.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:376782-377216:+ | gene-YIR015W_VR1 | rna-NM_001179537.1_VR1 | cds-NP_012280.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:354702-355136:+ | gene-YIR015W_ZTW1 | rna-NM_001179537.1_ZTW1 | cds-NP_012280.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:376086-376520:+ | gene-YIR015W_Sparadoxus | rna-NM_001179537.1_Sparadoxus | cds-NP_012280.1_Sparadoxus | 85.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |