RPR1 (YNCE0007C)

Gene profile

Gene name: RPR1
Reference locus (S288C): YNCE0007C
Gene biotype: RNase_P_RNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:111702-112070:- gene-YNCE0007C_AKU4011 rna-NR_132166.1_AKU4011 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:313890-314258:+ gene-YNCE0007C_BG1 rna-NR_132166.1_BG1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:117103-117471:- gene-YNCE0007C_Bruggeman rna-NR_132166.1_Bruggeman Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:113886-114254:- gene-YNCE0007C_CAT1 rna-NR_132166.1_CAT1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:111641-112009:- gene-YNCE0007C_CBS1585 rna-NR_132166.1_CBS1585 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia CM005347.1:113275-113643:- gene-YNCE0007C_CBS436 rna-NR_132166.1_CBS436 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:111922-112290:- gene-YNCE0007C_CBS6412 rna-NR_132166.1_CBS6412 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:116534-116902:- gene-YNCE0007C_CBS6413 rna-NR_132166.1_CBS6413 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:115525-115893:- gene-YNCE0007C_CENPK1137D rna-NR_132166.1_CENPK1137D Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:112032-112400:- gene-YNCE0007C_EthanolRed rna-NR_132166.1_EthanolRed Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:112291-112659:- gene-YNCE0007C_FaliES1 rna-NR_132166.1_FaliES1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000398.1:31176-31544:- gene-YNCE0007C_JAY291 rna-NR_132166.1_JAY291 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:115956-116324:- gene-YNCE0007C_MUCL30387 rna-NR_132166.1_MUCL30387 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:111927-112295:- gene-YNCE0007C_MUCL30388 rna-NR_132166.1_MUCL30388 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:111011-111379:- gene-YNCE0007C_MUCL39482 rna-NR_132166.1_MUCL39482 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:115641-116009:- gene-YNCE0007C_MUCL42920 rna-NR_132166.1_MUCL42920 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:117666-118034:- gene-YNCE0007C_NCIM3186 rna-NR_132166.1_NCIM3186 Unknown 99.1 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:116111-116479:- gene-YNCE0007C_NCYC1407 rna-NR_132166.1_NCYC1407 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:120143-120511:- gene-YNCE0007C_PE2H3 rna-NR_132166.1_PE2H3 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:116058-116426:- gene-YNCE0007C_PE2H4 rna-NR_132166.1_PE2H4 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:117667-118035:- gene-YNCE0007C_S288C rna-NR_132166.1_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:125197-125565:+ gene-YNCE0007C_SA1 rna-NR_132166.1_SA1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:112696-113064:- gene-YNCE0007C_ThermosaccDry rna-NR_132166.1_ThermosaccDry Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:112232-112600:- gene-YNCE0007C_VR1 rna-NR_132166.1_VR1 Unknown 99.4 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:111053-111421:- gene-YNCE0007C_ZTW1 rna-NR_132166.1_ZTW1 Unknown 99.7 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:114280-114648:- gene-YNCE0007C_Sparadoxus rna-NR_132166.1_Sparadoxus Unknown 91.6 99.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files